Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele56g1042 | ATGGCATGGCCTATTTCATTTGGTCCAGGCTTGGTGTGCACTATCTGTGCCAGCGCCAGTACTAGTTGGGTAACATCATGGCTGTGTCCGCCATCTTTGAAATTTGAAAGGGACTTATTTCAGAAAGCCCCTTCTGCTTTGTGCTTTAATCAGTCCATTATAAACATATTTCATAAACAAGGTTTTGTCCGTGGAGCATTGCGAGCAAGATTTGAAGGCAGCTTAGCTCTGAGAAGATGGGGCGTATGCACAGCCGTTGAAGAAAATATCTGCAAATTCGCGAAGAAGGGGTTGACTCCGTCGCAGATTGGTGTCATTCTCCGAGATTCTCACGGACTTGCGCCCGAAATTCCAGAGGATCTTTATCATTTGATCAAGAAGGCAGTTTCAATTCGCAAGCATCTTGAGAGAAACAGGAAGGACAAGGATTCCAAGTTCAGGTTAATTCTGGTCGAAAGCAGAATCCACCGGCTTGCTCGCTATTACAAAAAAACTAAGAAGCTCCCACCAGTATGGAAATAG | 522 | 0.4483 | MAWPISFGPGLVCTICASASTSWVTSWLCPPSLKFERDLFQKAPSALCFNQSIINIFHKQGFVRGALRARFEGSLALRRWGVCTAVEENICKFAKKGLTPSQIGVILRDSHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK | 173 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele56g1042 | 173 | CDD | Ribosomal_S15p_S13e | 107 | 173 | IPR000589 | GO:0003735|GO:0005840|GO:0006412 | |
Lele56g1042 | 173 | Gene3D | - | 88 | 115 | - | - | |
Lele56g1042 | 173 | SMART | Ribosomal_S13_N_2 | 68 | 113 | IPR012606 | GO:0003735|GO:0005840|GO:0006412 | |
Lele56g1042 | 173 | Pfam | Ribosomal protein S15 | 112 | 167 | IPR000589 | GO:0003735|GO:0005840|GO:0006412 | |
Lele56g1042 | 173 | PANTHER | RIBOSOMAL PROTEIN S15P/S13E | 85 | 173 | IPR023029 | - | |
Lele56g1042 | 173 | FunFam | 40S ribosomal protein S13 | 116 | 173 | - | - | |
Lele56g1042 | 173 | SMART | Ribosomal_S15_2 | 105 | 173 | IPR000589 | GO:0003735|GO:0005840|GO:0006412 | |
Lele56g1042 | 173 | SUPERFAMILY | S15/NS1 RNA-binding domain | 108 | 172 | IPR009068 | - | |
Lele56g1042 | 173 | ProSitePatterns | Ribosomal protein S15 signature. | 131 | 161 | IPR000589 | GO:0003735|GO:0005840|GO:0006412 | |
Lele56g1042 | 173 | Gene3D | - | 116 | 173 | - | - | |
Lele56g1042 | 173 | Pfam | Ribosomal S13/S15 N-terminal domain | 85 | 112 | IPR012606 | GO:0003735|GO:0005840|GO:0006412 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele56g1042 | Lele-ChrLele56 | 13625892 | 13629350 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele56g1042 | 86 | 173 | Cytoplasmic Ribosomal Protein Gene Family | AT4G00100 | 78.704 | 8.13e-54 | 166 |