Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g1040 ATGAATTCTGTTCATTTCCTGGTTTCTTCTCTGTTTCTTGTCTTGCTTGTATTTCCTAGCCTGCAAACTGTTCGAGGAAATGCGGAGCTGAGAGCTTTGATGGAGTTGAAGTCGTCTCTGGATCCAGAGGACAAGGTTCTTGGTTCTTGGACCAGTGATGGTGAGCCTTGTAGTGGTTTGTTTGAAGGGATAGCATGCAACGAGCACAGGAAAGTGGCCAACATTTCGTTACAGGGAAAGGGGCTCTCAGGATGGCTCTCTCCATCAGTGACTGAACTCAAATGTTTATCTGGTTTATACTTGCACTACAACAATCTTTCCGGGGAGATCCCCAGAGAGATTTCAAATCTCACTGATTTGGTAGATCTCTATCTTGACTTCAATAATCTAACTGGAAACATACCTTCTGAGCTCGGCAACATGCCTAATCTCCAAGTGCTGCAGTTAGGATATAATCAGCTTGTGGGAACTATACCAAAAGAGATTGGCTCCTTGAAGCAGCTTACTGCCTTAGAATTGCAATATAACAAATTAACTGGTTCAATTCCTCTCAGCTTGGGGAATTTGGAGAAGCTAAGGATGCTAAATCTGAGCTTTAACAGCTTCAATGGTTCAATCCCTGCAACACTTGCTGGTCTTGCAAAGTTGCAAGTTCTTGATATTCGAAACAATTCTCTATCAGGAAGAGTTCCTTCTGCTTTGAAGGCATTGAGGGATGGATTCCAAGGTGCAAATAACCTGGATTTATGTGGACATGGGTTTTCTACTTTGAAAGCTTGCATCAATGATCCAAATTTAAAACCTAGCCAGATTGACACCTCCAATCCAACCACAAAAGAAGGTATTCCTCACGCAAAGGATTTTCCGGAACCCGCAAATTTTCAGCTGCATTGTAACCAGACCCATTGCTCAAAATCAAGAATGTTCCAAGCACTCATTGCAGCAAGTGTTATAACCATCATAATCACATTCATATGTGCTGGACTTTTCACTTTTTTCAGATACCGCCGCCAAAAGCAAAGAATCACAAATTCATCAGAATCTTCTGAAGGGAAACTCAGTCCTGATCAGCCTAAAGAAATTTACAAAAGAAGTCCATCGCCACTCGTTAATCTTAACTACTATAATGGATGGGATCCTAATGCAATGACTGATTCTCAAAATGGAAACAGATTATCCCATGAGTATCTAAACCATTATAGGTTTAATGTGGATGAGATTGAATCTGCTACACAGTACTTCTCTGAGGCTAACTTATTAAGTAAGAACAAATTATCAGCAGTTTACAAAGGAGTTCTCAGAGATGTCTCACTTGTGGCTATAAGACGCATTAATGTGACATGTTGCAAGACTGAGGAAGATGAATTTGTAAATGGGTTGAACTTAGTACTTTCTTTGAGACATGAAAACCTAATTAGGGTCAGAGGTTTCTGTTGCTCTGCAAGTAGAGGTGAATGTTTCCTTGTCTATGACTTTGCCCCTAAGGGTGACCTGTCTCAGTACCTCGACATGGAAGAAGGAAGTGGTCAAGTTCTTGATTGGTCCAAGAGGGTTTCTATCATCAAGGGCATCGCAAAAGGTATTGGATATCTACACAGCAATGAAACAAACAAGCCAACAATTGTACACCAGAATATTTCAGTTGAAAAAGTTGTGCTTGACTATCAATTCAACCCCTTGATTATGGATTCTGCCCTCCCAAAGCTTCTCGCAGACGATGCAGTTTTCTCGGCTCTGAAAGTAAGTGCAGCCATGGGATACTTAGCTCCTGAATACATCACTACTGGGAGATTCACTGAAAAAAGTGACATTTATGCATTTGGGGTTATAATCCTTCAAGTAGTTTCTGGGAAAACTGTTATAGGTAGTTCAATCAAGATGGCGGTTGAGTCTTTCAGACTTGAAGAGTTTGTTGATTCAAATATGAAGGGAAGATATGTGAAATCTGAAGCAGCAATGCTGGCGAAGCTTGCAGTGATGTGTACTCATGAGCTTCCTATTGAGAGGCCAACTATGGTGGAAGTGATTCATGAGCTCAATGCATTTCCTGCTCAACAACATTCTTCTTGA 2070 0.4097 MNSVHFLVSSLFLVLLVFPSLQTVRGNAELRALMELKSSLDPEDKVLGSWTSDGEPCSGLFEGIACNEHRKVANISLQGKGLSGWLSPSVTELKCLSGLYLHYNNLSGEIPREISNLTDLVDLYLDFNNLTGNIPSELGNMPNLQVLQLGYNQLVGTIPKEIGSLKQLTALELQYNKLTGSIPLSLGNLEKLRMLNLSFNSFNGSIPATLAGLAKLQVLDIRNNSLSGRVPSALKALRDGFQGANNLDLCGHGFSTLKACINDPNLKPSQIDTSNPTTKEGIPHAKDFPEPANFQLHCNQTHCSKSRMFQALIAASVITIIITFICAGLFTFFRYRRQKQRITNSSESSEGKLSPDQPKEIYKRSPSPLVNLNYYNGWDPNAMTDSQNGNRLSHEYLNHYRFNVDEIESATQYFSEANLLSKNKLSAVYKGVLRDVSLVAIRRINVTCCKTEEDEFVNGLNLVLSLRHENLIRVRGFCCSASRGECFLVYDFAPKGDLSQYLDMEEGSGQVLDWSKRVSIIKGIAKGIGYLHSNETNKPTIVHQNISVEKVVLDYQFNPLIMDSALPKLLADDAVFSALKVSAAMGYLAPEYITTGRFTEKSDIYAFGVIILQVVSGKTVIGSSIKMAVESFRLEEFVDSNMKGRYVKSEAAMLAKLAVMCTHELPIERPTMVEVIHELNAFPAQQHSS 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g1040 689 SUPERFAMILY L domain-like 29 255 - -
Lele56g1040 689 SMART LRR_typ_2 141 165 IPR003591 -
Lele56g1040 689 SMART LRR_typ_2 93 117 IPR003591 -
Lele56g1040 689 SMART LRR_typ_2 213 236 IPR003591 -
Lele56g1040 689 SMART LRR_typ_2 189 212 IPR003591 -
Lele56g1040 689 FunFam Protein NSP-INTERACTING KINASE 2 493 683 - -
Lele56g1040 689 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 72 680 - -
Lele56g1040 689 SUPERFAMILY Protein kinase-like (PK-like) 388 680 IPR011009 -
Lele56g1040 689 Pfam Leucine rich repeat 167 226 IPR001611 GO:0005515
Lele56g1040 689 MobiDBLite consensus disorder prediction 343 364 - -
Lele56g1040 689 Pfam Leucine rich repeat N-terminal domain 27 67 IPR013210 -
Lele56g1040 689 Gene3D Transferase(Phosphotransferase) domain 1 493 687 - -
Lele56g1040 689 FunFam Protein NSP-INTERACTING KINASE 2 26 174 - -
Lele56g1040 689 FunFam Protein NSP-INTERACTING KINASE 2 385 492 - -
Lele56g1040 689 Gene3D Ribonuclease Inhibitor 176 249 IPR032675 -
Lele56g1040 689 Gene3D Phosphorylase Kinase; domain 1 379 492 - -
Lele56g1040 689 Pfam Protein tyrosine and serine/threonine kinase 422 679 IPR001245 GO:0004672|GO:0006468
Lele56g1040 689 Gene3D Ribonuclease Inhibitor 26 175 IPR032675 -
Lele56g1040 689 ProSiteProfiles Protein kinase domain profile. 414 683 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g1040 Lele-ChrLele56 13603928 13608082 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g1040 7 527 Miscellaneous Gene Families AT4G22730 56.877 0.0 580
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Lele56g1040 PK_Tyr_Ser-Thr 8.7e-30 CL0016