Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g1039 ATGGTGTGGGATAAGCAGGCGCATGAAATAAAGGAAGAATTTGAAGGGATTGGGCCTGCCAAAGCTTCTAGGGGACGATGCAGTTTTCTCAGCTCTGAAAGGGCTGCCATGGGATACTTAGCTCCTGAATACATCACTACAGGAATATTCATTGAGCAAAGTGACATATATGGATTTAGGGTTATAATCCTTCAAATAGTTTCTGGGAAAACTGTTATGGGTAGTTCAAGCAAGATGGCAGTTGAGTCTTTCATATTTGAAGAGCTTATTGATTCAAATATGAAGGGACGATATGTGAAATTTGAAGCAGCAATGCTGGCGAAACTTGCAGTGACGTGTACTCATGATTTTCCAGATCAGAGGCCAACTATGGTGGAAGTGATTCGGAGCTGA 393 0.4198 MVWDKQAHEIKEEFEGIGPAKASRGRCSFLSSERAAMGYLAPEYITTGIFIEQSDIYGFRVIILQIVSGKTVMGSSSKMAVESFIFEELIDSNMKGRYVKFEAAMLAKLAVTCTHDFPDQRPTMVEVIRS 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g1039 130 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 35 129 - -
Lele56g1039 130 Pfam Protein tyrosine and serine/threonine kinase 32 129 IPR001245 GO:0004672|GO:0006468
Lele56g1039 130 Gene3D Transferase(Phosphotransferase) domain 1 8 130 - -
Lele56g1039 130 SUPERFAMILY Protein kinase-like (PK-like) 30 129 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g1039 Lele-ChrLele56 13586026 13587133 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g1039 10 129 Receptor kinase-like Gene Family AT5G10290 28.986 5.02e-18 77.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Lele56g1039 PK_Tyr_Ser-Thr 1.9e-07 CL0016