Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g1038 ATGCTAATGTCGTCATGTTACTCTTCTTCTATGTACGTAGACATTGGCCTTCACTGTCACCATCATATCTGTTTTGCTGCTTCTTCTTCTCTGTCGTGTTTTTCTCCATGGTCTTGTTCTTCTCTACTTCTACTGTTTCTTACTTCTGTTTGCTTCTTCATCGTCGCCGCTTCTTCTAGCAAGAATAATAATCATGGTGGTTGGCCATATGTATTTGACAGAAATGGAATCTCTATCTTCTTCAGATATTTTTCTCCATCTTCTTCATATCTCAGTCTTCTTCTTCATCTTGTTCAAACCGCTGCCATTGCTTTTTGGAGAATTGCTGTTAGTGGTGGACATCGACAAAAGACCAACAATGGGACCCCAAAACTTTCAGTTGGAAAAGCTGTCCTTGGCCATCAATTCAACCCCTTGATTATGGATTCTGGCTTGTCAAAGCTTCTAGCCGACGATGCAGTTTTCTCAGCTCTTAAAGTAAGCGCCACCATGGGACACTTAGCTCCTGAATACATCCCTACAGGGAGATTCACTAAGAAAAGTGACATATATGCATTTGGGGTTATAATCCTTCAAGTAGTTTCTGGGAAAACTGTTATAGGTAGTTCAATCAAGATGGCAGTTGAGTCTTTCATATTTGAAGAGTTTGTTGATTCAAATATGAGGGGATGA 672 0.4018 MLMSSCYSSSMYVDIGLHCHHHICFAASSSLSCFSPWSCSSLLLLFLTSVCFFIVAASSSKNNNHGGWPYVFDRNGISIFFRYFSPSSSYLSLLLHLVQTAAIAFWRIAVSGGHRQKTNNGTPKLSVGKAVLGHQFNPLIMDSGLSKLLADDAVFSALKVSATMGHLAPEYIPTGRFTKKSDIYAFGVIILQVVSGKTVIGSSIKMAVESFIFEEFVDSNMRG 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g1038 223 Pfam Protein tyrosine and serine/threonine kinase 140 200 IPR001245 GO:0004672|GO:0006468
Lele56g1038 223 ProSiteProfiles Protein kinase domain profile. 1 223 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele56g1038 223 SUPERFAMILY Protein kinase-like (PK-like) 132 203 IPR011009 -
Lele56g1038 223 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 132 203 - -
Lele56g1038 223 Gene3D Transferase(Phosphotransferase) domain 1 123 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g1038 Lele-ChrLele56 13580656 13581972 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g1038 131 198 Receptor kinase-like Gene Family AT1G53420 39.706 2.26e-13 67.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Lele56g1038 PK_Tyr_Ser-Thr 5.6e-07 CL0016