Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g1027 ATGGAGGTCAGGGATGTCGTTAATAGTGGGGTCACGGTGGTCCGATCAGATGCTCCGTCGAACTACCATGTAGCTCTGAGGACTGAAGACCCGTCTTCCCCCGGGGGATCAATGGCACCGGCGTCTCAAGGGAGTGTTCCGCCACCTCAACCAGTTACTATGGGAGTCGCTCCAGCTGCGACAACGATGCCGGTGAAGAAGAAGAGGGGTCGGCCGAGGAAGTACGGACCAGATGGCTCAGTGACGACGATGGCTCTATCTCTGTCGCCGATATCTTCTTCAGCTCCGCCGGCAGTAATCGATTTCTCGGCGGGGAAACGCGGTAAAGTGCGCCCTGCTAACTCAGTACACAAAGCCAAATTCGAAGTTGAAAATTTAGGTGAGTGGGTTGCAGGCACTGTTGGTACTAATTTTACACCTCATATTATTACCATTAATTCTGGAGAGGACATCACTATGAAGATAATATCATTTTCTCTGCAGGGAGCGCGAGCTATATGCATTCTTTCTGCAAGTGGAGTCATATCAAGTGTAACGCTTTGGCAGGCTGATTCTTTTGGGGGTACATTGACGTATGAGGGATGGTTTGAAATTTTGTCATTATCTGGCTCATTCATGCCGAATGAAAGTGTAGGAACACGAAGCAGATCGGGTGGTATGAGCGTTTCTTTAGTGAGTCCAGATGGACGTGTCATAGGGGGTAGTGTAGCCGGTTTGTTGGTAGCAGCAAGTCCTGTGCAGGTTGTGGTTGGCAGTTTTCTGGCAGGAAACCAGAATGATCTGAAGGCAAAGAAACAGAAACACGAGATTAATGTATCAACAGCAATTGTTCCTTTGTCTATTGCTGATCCATTACCTATCCTCTCATCATCTCCACCTTCCTTCCCTCCTCACAATTGGTCTGCATCGCCTTCTGATACAAGGAACAACATGAACACTGACATTAATGTGCCTCTACCTGCAGGGTAA 969 0.485 MEVRDVVNSGVTVVRSDAPSNYHVALRTEDPSSPGGSMAPASQGSVPPPQPVTMGVAPAATTMPVKKKRGRPRKYGPDGSVTTMALSLSPISSSAPPAVIDFSAGKRGKVRPANSVHKAKFEVENLGEWVAGTVGTNFTPHIITINSGEDITMKIISFSLQGARAICILSASGVISSVTLWQADSFGGTLTYEGWFEILSLSGSFMPNESVGTRSRSGGMSVSLVSPDGRVIGGSVAGLLVAASPVQVVVGSFLAGNQNDLKAKKQKHEINVSTAIVPLSIADPLPILSSSPPSFPPHNWSASPSDTRNNMNTDINVPLPAG 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g1027 322 Pfam Plants and Prokaryotes Conserved (PCC) domain 140 253 IPR005175 -
Lele56g1027 322 CDD DUF296 139 253 IPR005175 -
Lele56g1027 322 FunFam AT-hook motif nuclear-localized protein 1-like 140 271 - -
Lele56g1027 322 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 38 283 IPR039605 GO:0003680
Lele56g1027 322 MobiDBLite consensus disorder prediction 21 59 - -
Lele56g1027 322 ProSiteProfiles PPC domain profile profile. 135 278 IPR005175 -
Lele56g1027 322 SUPERFAMILY AF0104/ALDC/Ptd012-like 137 255 - -
Lele56g1027 322 Gene3D - 140 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g1027 Lele-ChrLele56 13412655 13417842 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g1027 8 317 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 57.522 1.14e-108 318