Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g1019 ATGAATGCTATGCAGAGAGAGAAACAAACAGATTGGATTTCAATCAAAGGTACCGCTTCAAGCTTTGTAACTGAGAAAAGATTTCAACTTTGGACCATGAAAGGGGTCAGTCAAATTCGTCACTTTCTTCATCACGTTCTTCTGTTTGCTGCTCTTTTCTCATCACTTTCATCTTTCACAGTCTCCTCGTTTCCAGAACCTGAAATGGAAATTCTTCATCAATTTAAGGTAAATGTCACTGATGACCCTTACAACAGCCTGAGTTCATGGGTATTTAGTGGAAATCCATGTGAAGATTACATGGGTGTTTCTTGTACTTCAGAAGGATTTGTAGAAAAAATAGTTCTTTGGAACACTAGCTTAGTTGGAACTTTGTCTCCAGCACTTTCCCAGTTAAAATTGTTGAAGGTTTTGACATTGTACGGGAATCGGTTTTCTGGTAAAATCCCAGAAGAATATGCTGAGTTTCAATCAATATGGAAGATCAATTTAAGCTCTAATGGATTGTCTGGTCAAATCCCAGAATTCATAGGTAATATACAGAGCCTTCATTTTCTTGATTTGTCATTCAATGCCTTCTCTGGAGAAATACCATCATCTTTGTTCAAATTCTGCAACAAAACCAAGTTCCTTTCTCTTTCTCATAACAATCTCTCAGGTTCAGTTCCATCTTCCATTGTGAATTGCTTTAACCTTGAAGGTTTTGATTTTTCTTTCAACAATCTCACTGGGAATATTCCTTCAACACTTTGTGAAATTCCTAGGTTGTCCTTTGTATCACTAAGGAACAATGCCTTATCAGGAACAGAGCAAGATCAGATTTTCTCAGAATGTCAGAGTTTGGTATATTTAAATCTTGCTATTAACATATTCAGTGGTTATGCACCATTCAACATGCTTGAAATGAAGAATCTTACTTATTTCAATATATCATATAATGGATTCAGTGGGAATATTCCTGAGATGAGTTCATGTAGTGAGAGATTAGAATTTTTGGATGCTTCAGGGAATAATTTGGGTGGGGAGATTCCAAAGAGCATAACAAGATGCAAGAATCTCAAGCTTTTGGCTTTGGAGGTAAATAGGCTTATAGGGACAATCCCATTAGGGATTCAAGAATTGAAGAGTTTGTTAGTTGTTAAACTGGGTGATAATTCAATTGGCGGAATCATTCCCAAGGGTTTTGGTAACATTGAACTTCTTGAGATTCTGGATTTGCACAATCTAAACCTCACTGGTGAAATTCCAAATGATGTAAGCAATTGCAGGTTTCTTCTTGAGTTGAATGTTTCTGGTAATAACTTAGAAGGAGATATTCTTCAGACCCTTTACAACATGACAAACATGGAGGTTCTTGACCTACATCAAAACAAGCTCAATGGAAGCATCCCACTAAGCCTAGGAAACTTATCAAACATTAGATACTTAGATTTGTCACATAATTTGCTTTCTGGTTCAATCCCTTCTTCACTTGGTAATTTTAAATACTTAATGTATTTTAACCTGTCATTCAACAATCTCTCTGGTGTCGTTCCTCCTATTGAAACCATACAGGGTTTTGGTTCATCTGCATTTTCCAATAATCCTTTTCTATGTGGTTCTCCTTTAGATGATACCTCTTGCACAGAAAATGGCACAACTTCAGCTTCTGGGAAGACTAAAGTGCTTAGTGTTTCTGCAATTGTTGCCATTGTTGCTGCAGTTTTCATTCTTGCTGGGGTTTGTTTGGTGGCATTCTTGAATACTAAGGCTCATAACAGAAAGAAGGATGATCAGACAATGATTGTTGATGAGAGCACACCTCTTGGATCATCAATAGAAGAATCATCAAGTGTTGTAATAGGGAAGCTGGTTCTTTTCAACAAGAGCTTACCATCACAATATGACAATTGGGAAGCAGGAGCAAAAGCATTGCTCAACAAAGAGTCCTTGATCGGCGCCGGATCAATCGGTACAGTGTACAGAAAATATTTTGAAGGTGAAGTATCAGTTGCAGTTAAAAAGCTTGAAACTTTGGGAAGAATTAGAAGCCAGAATGAATTTGAACATGAAATGGTTCAACTTGGGAACCTCAAACACCCAAATTTAGTTTCTTTCCAAGGTTACTATTGGTCCCCAACAATGCAAATGATCCTATCAGAGTTTGTCCCAAATGGAAATCTCTTTGATAATCTACACACAACTAGCCACGTCAGCAATCAACAACAACTAAATTGGTCTAGAAGGTTACAGATTGCACTTGGAACAGTGAAAGCCCTCGCCTATCTTCACCATGATTGTCAACCTCCAATTCTGCATCTGAACCTCAAATCCTGCAACATACTCTTAGACAACAAGTATGAAGCTAAGCTATCAGATTATGGTCTAAACAAGTTACTTCCTATTAATAACAATTATGGTGGTGGTGGTGGAACCAAATTCCACAATGCAGTGGGGTACATTGCACCAGAGTTTGCTACGAGTTTAAGGCAGAGCGAGAAATGCGATGTTTATAGTTTTGGAGTAATTCTGTTGGAACTGGTCACAGGGAAGAAGCCTGTAGAAAGGGTAGCAGCAAATGGAGCGGTGGTGCTGTTATGTGAGTATGTGAGAGTGTTGTTGGAGAGTGGTTCTGCTTCAGATTGCTTGGATAGAAGATTGGTAGGTTTGGATGAGAGTGAATTCATTCAAGTTATGAGAATGGGACTAATCTGTACTTCACAAGATCCTTCTAGGAGACCAAGCATGGCTGAGATTGTTCAGTTCCTTGAGTCTATTGAAATTGCATCAGAATCACGTTGA 2781 0.3815 MNAMQREKQTDWISIKGTASSFVTEKRFQLWTMKGVSQIRHFLHHVLLFAALFSSLSSFTVSSFPEPEMEILHQFKVNVTDDPYNSLSSWVFSGNPCEDYMGVSCTSEGFVEKIVLWNTSLVGTLSPALSQLKLLKVLTLYGNRFSGKIPEEYAEFQSIWKINLSSNGLSGQIPEFIGNIQSLHFLDLSFNAFSGEIPSSLFKFCNKTKFLSLSHNNLSGSVPSSIVNCFNLEGFDFSFNNLTGNIPSTLCEIPRLSFVSLRNNALSGTEQDQIFSECQSLVYLNLAINIFSGYAPFNMLEMKNLTYFNISYNGFSGNIPEMSSCSERLEFLDASGNNLGGEIPKSITRCKNLKLLALEVNRLIGTIPLGIQELKSLLVVKLGDNSIGGIIPKGFGNIELLEILDLHNLNLTGEIPNDVSNCRFLLELNVSGNNLEGDILQTLYNMTNMEVLDLHQNKLNGSIPLSLGNLSNIRYLDLSHNLLSGSIPSSLGNFKYLMYFNLSFNNLSGVVPPIETIQGFGSSAFSNNPFLCGSPLDDTSCTENGTTSASGKTKVLSVSAIVAIVAAVFILAGVCLVAFLNTKAHNRKKDDQTMIVDESTPLGSSIEESSSVVIGKLVLFNKSLPSQYDNWEAGAKALLNKESLIGAGSIGTVYRKYFEGEVSVAVKKLETLGRIRSQNEFEHEMVQLGNLKHPNLVSFQGYYWSPTMQMILSEFVPNGNLFDNLHTTSHVSNQQQLNWSRRLQIALGTVKALAYLHHDCQPPILHLNLKSCNILLDNKYEAKLSDYGLNKLLPINNNYGGGGGTKFHNAVGYIAPEFATSLRQSEKCDVYSFGVILLELVTGKKPVERVAANGAVVLLCEYVRVLLESGSASDCLDRRLVGLDESEFIQVMRMGLICTSQDPSRRPSMAEIVQFLESIEIASESR 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g1019 926 Pfam Leucine rich repeat N-terminal domain 67 105 IPR013210 -
Lele56g1019 926 Gene3D Ribonuclease Inhibitor 208 273 IPR032675 -
Lele56g1019 926 Pfam Protein kinase domain 641 914 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele56g1019 926 SUPERFAMILY Outer arm dynein light chain 1 112 231 - -
Lele56g1019 926 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 209 916 - -
Lele56g1019 926 ProSiteProfiles Protein kinase domain profile. 639 919 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele56g1019 926 CDD STKc_IRAK 645 919 - -
Lele56g1019 926 SUPERFAMILY Protein kinase-like (PK-like) 641 918 IPR011009 -
Lele56g1019 926 FunFam Putative LRR receptor-like serine/threonine-protein kinase 717 923 - -
Lele56g1019 926 Gene3D Ribonuclease Inhibitor 274 549 IPR032675 -
Lele56g1019 926 Gene3D Phosphorylase Kinase; domain 1 639 719 - -
Lele56g1019 926 Gene3D Ribonuclease Inhibitor 65 207 IPR032675 -
Lele56g1019 926 FunFam Putative LRR receptor-like serine/threonine-protein kinase 616 715 - -
Lele56g1019 926 Pfam Leucine rich repeat 427 483 IPR001611 GO:0005515
Lele56g1019 926 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g12460 66 203 - -
Lele56g1019 926 SUPERFAMILY L domain-like 205 538 - -
Lele56g1019 926 Gene3D Transferase(Phosphotransferase) domain 1 720 926 - -
Lele56g1019 926 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g12460 204 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g1019 Lele-ChrLele56 13247246 13250735 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g1019 68 925 Receptor kinase-like Gene Family AT1G62950 60.990 0.0 1015
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Lele56g1019 Pkinase 1.5e-36 CL0016