Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele56g1005 | ATGTCAAATACAATTGTTACTAGTGATCCATACGTGACAGTATCTCTGGCGGTTTCTGTAATTGTAAGAACATTTGTGATCGAGAACGATGAGAACCCTAACTGGATGCAGCATTTCAAAGTTCCTGTGGCTCATTGTGCTTCAGAAGTACATTTTGTGGTAAAAGATAGTGATATTGTGGGCTCACAAGTCATGGGTGTGGTTGGAATTCCAGTGGAACATTTTTCCATTCAATACATTCCTTTTGATAAGGTGGCACTTTATGGTCATGGAATAAGTGCAGGTCCTAGTTATGGAGGGGTTCCAGGTTCCCTTCTTCCACATAATTTGAAGATGCAAGGTGGTGTGAGTTATGAGCATGGCAATTGTTGGCGTGACATCTTTGAGGCGATAAGTCAGGCCCGGCGATTAGTATACATTGTGGGGTGGTCTGTGTACCACAATGTTAGACTGGTTCGAGATGCTGGTGATGCTAAAGCTTGCACTTTAGGTAGTCTTCTCAAAATCAAATCACAGGAAGATATATGGCAGCTCTGCTGTATTTGGTTACTTCGTGGTTCAGATGATATATTGATCCATTTCTTCCTTGCCTATCTTTGA | 600 | 0.4183 | MSNTIVTSDPYVTVSLAVSVIVRTFVIENDENPNWMQHFKVPVAHCASEVHFVVKDSDIVGSQVMGVVGIPVEHFSIQYIPFDKVALYGHGISAGPSYGGVPGSLLPHNLKMQGGVSYEHGNCWRDIFEAISQARRLVYIVGWSVYHNVRLVRDAGDAKACTLGSLLKIKSQEDIWQLCCIWLLRGSDDILIHFFLAYL | 199 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele56g1005 | 199 | Gene3D | C2 domain | 2 | 84 | IPR035892 | - | |
| Lele56g1005 | 199 | ProSiteProfiles | C2 domain profile. | 1 | 86 | IPR000008 | - | |
| Lele56g1005 | 199 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 5 | 80 | IPR035892 | - | |
| Lele56g1005 | 199 | Pfam | C2 domain | 7 | 74 | IPR000008 | - | |
| Lele56g1005 | 199 | PANTHER | PHOSPHOLIPASE D | 5 | 190 | IPR015679 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele56g1005 | Lele-ChrLele56 | 12792245 | 12793541 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele56g1005 | 6 | 198 | Phospholipase D Gene Family (Wang group) | AT2G42010 | 47.521 | 8.09e-65 | 214 |