Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g1004 ATGACATCGTATAGGAATCATGAGATTGAGAAGGATCAAGACGACGATGGTGGAGCTTCAGAGCTCAGCAACATGGCCATTGAGCAAGAACAAGACCCTGCTACCACCAGCAGTACGACGGCATTTCAAGTGTTGCCGTTGAAGGATGAGGCAAATGATTCGGCGGACTCGGACCGGAAGGGTGAGGCGGCTCGAGTTGGGGCTGGTCAGGTGGCGATAAATATGCAGGTGCCAATGCACTTGCAGGCGACGACAACTCGACGGTCATCGACGAAGGACCGCCACACCAAGGTGGAAGGTCGGGGACGGAGAATCCGAATACCAGCCACGTGTGCGGCTAGGATCTTTCAGCTGACTCGGGAGTTAGGCCACAAGTCCGACGGGGAAACCGTGCGGTGGCTTCTCGAGCACGCCGAGCAGGCCATCATCGAGGCCACTGGCACTGGCACCGTCCCTGCCATCGCCGTCTCTGTCGGCGGAACTCTTAAAATTCCCACGACGTCTAACAATTCCAATGCCGAAACCACCAAGAAGCGGAGACGACCATCAAATAGCGATTTCGTGGATATAGAAGACGCTGTTTCGCAGTCTTACGGGTTGGCCCCGATTCAACCCACGGTTCCTCAAGGACTAGTGCCGGTGTGGGCAGTGGGAAACACAGGTATGGTGGTTCCAACGAATGCCTTCTGGATGATCCCTCCGGCGGCGGCGACGCCGTTCTCAACTGGAGTAACTGGCTCGTCCAATCAACAACCTCGGATATGGGCCTTCTCTCCAACGGTAACCCCTGTATTCAACATGTCGGTGAGACCCATGGAACCTACGATAAGTATCCCAACCGGCGTAGAAGTTTCAGGCAGCAGGTCTAACTCTGGGGTAACTACTAGCACGGCGGGGCCGAAGGGGGCGAAGAGTTCAAACATGGCACCAAGCGTCAGCTCAAGTGGGAGTGTTAGCGGCAGCAAGTTTCAGATGTGGAGGGATTTTTCTTTGGAGATTTATGATAAGCAAGAGTTGCAGTTGACGGGGCGGCGATCAGAGGATAAATGA 1050 0.5495 MTSYRNHEIEKDQDDDGGASELSNMAIEQEQDPATTSSTTAFQVLPLKDEANDSADSDRKGEAARVGAGQVAINMQVPMHLQATTTRRSSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETVRWLLEHAEQAIIEATGTGTVPAIAVSVGGTLKIPTTSNNSNAETTKKRRRPSNSDFVDIEDAVSQSYGLAPIQPTVPQGLVPVWAVGNTGMVVPTNAFWMIPPAAATPFSTGVTGSSNQQPRIWAFSPTVTPVFNMSVRPMEPTISIPTGVEVSGSRSNSGVTTSTAGPKGAKSSNMAPSVSSSGSVSGSKFQMWRDFSLEIYDKQELQLTGRRSEDK 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g1004 349 MobiDBLite consensus disorder prediction 24 45 - -
Lele56g1004 349 MobiDBLite consensus disorder prediction 280 321 - -
Lele56g1004 349 MobiDBLite consensus disorder prediction 165 186 - -
Lele56g1004 349 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 20 336 IPR005333 GO:0003700
Lele56g1004 349 MobiDBLite consensus disorder prediction 1 18 - -
Lele56g1004 349 MobiDBLite consensus disorder prediction 1 66 - -
Lele56g1004 349 Pfam TCP family transcription factor 90 165 IPR017887 -
Lele56g1004 349 ProSiteProfiles TCP domain profile. 91 145 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g1004 Lele-ChrLele56 12780859 12781908 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g1004 87 340 TCP Transcription Factor Family AT2G45680 47.518 4.99e-70 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lele56g1004 TCP 3.3e-28 No_clan