Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0997 ATGGCATCGTCTCCATGTTCCAAGAGGCACCCTATGTACCGTGGAATCCGGTGCCGGGGAGAAAAATGGGTGTCGGAGATCCGGGAGCCCCGTAAACCATCACGTATATGGCTTGGGACATTTCCCACACCGGAGATGGCGGCTGCTGCTTATGATGTAGCGGCGTTGGCTCTGAAGGGCAAGGATGCGGTTCTCAACTTGCCTGAGTGGGCTGGACGGTATCCGGTGCCGCTTTCCACTTCTGCTCCTCATATTTGCAGTGCTGCTGCCGCCGCCGCCTCTCTCGTGAATGCTGAAGCCATTTCCGCTAGGGTCGCGCACAAACACATTAACGCGTCTTCTTCATCTGTTGATGAATCTTACAATAATGACAGTACCATCTCAATCTCATCGACCTGGTCTGAAACAGAAGATCATCAATTTGTGGACGAGGAAGCCATTTTCGGCATGCCTAGTTTGCTCCTAGACATGGCAGAAGGAATGTTGCTGTCTCCTCCCAGAATCACCCCTCCACCCACAGACAACTTGCCAGCATATTGTTTGTGGAACTACTTTTAA 558 0.5197 MASSPCSKRHPMYRGIRCRGEKWVSEIREPRKPSRIWLGTFPTPEMAAAAYDVAALALKGKDAVLNLPEWAGRYPVPLSTSAPHICSAAAAAASLVNAEAISARVAHKHINASSSSVDESYNNDSTISISSTWSETEDHQFVDEEAIFGMPSLLLDMAEGMLLSPPRITPPPTDNLPAYCLWNYF 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0997 185 Gene3D AP2/ERF domain 12 69 IPR036955 GO:0003700|GO:0006355
Lele56g0997 185 CDD AP2 13 69 IPR001471 GO:0003700|GO:0006355
Lele56g0997 185 SMART rav1_2 12 74 IPR001471 GO:0003700|GO:0006355
Lele56g0997 185 ProSiteProfiles AP2/ERF domain profile. 12 68 IPR001471 GO:0003700|GO:0006355
Lele56g0997 185 SUPERFAMILY DNA-binding domain 12 68 IPR016177 GO:0003677
Lele56g0997 185 Pfam AP2 domain 13 60 IPR001471 GO:0003700|GO:0006355
Lele56g0997 185 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 7 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0997 Lele-ChrLele56 12613865 12614422 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0997 9 169 AP2-EREBP Transcription Factor Family AT2G36450 51.534 8.78e-43 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele56g0997 AP2 6.9e-09 CL0081