Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0981 ATGGTATCATCGTCAGCTGGATTCTGCTACTCCGAAGTATCAGCACCGGGCAATAACCCGGCGGCGGCGATCCAGACCCATATGGGGAATCATCGTCATCATAATCAGATCCAAGGGTTTGAATCCCACCCGGATATGTACAACCTCACAACCAACATGGACATGATTGGCTTCTCCAAGAATCTTCACCAGCAACAGCAAAGTGATTGGAAAAGCTTTCTGGGTAAACCCGCAACCCATCACCACAATCCGGGTCCTTCTTCTTCTTCTTCCAAGACGACCACCATGAATAATAATAATAATGAGCCTGGTTCCACCAATTTCTATCAGTACAACACCAAACCAGATTTCACATCCAACGAGAATCTGATTGTAGGAGAACCTCATAACCATCATCATCAACAACATAATTCTTCCTCTACCACTTGGCAAGATAACAGATTACTTGTGGATGATTCTTCTTTAAGGTGTGTGTTCCCTTGTGAAGGAAACGAAATGCCAAGTCAAGGCCTTTCGCTCTCTTTGAGTTCTAACAATCCCTTAAGTATTGGGTTACAATCTTTTGAACTAAGACACACCAACAACAACAACCAACTTCATCATCATCAGAACCAATCAGATTTTGTTTCTTCAACTAGTTCTGGAGACAAGTTATTGTTGGGGAAATCATCAATGAATCTTCTTCATCAACAACAACAAGAAGCTTCTGGGAATCTGTATCAAGGCCATTTTCTACTTAAGAACTCAAAGTATTTGGTCGCTGCACAGGAACTTCTCAACGAGTTTTGCAGTCTGGGAACGAAGCAAAGTGACTTAGTGAAGCAAAAGTCATCATCAACAACTCAGAAAAACAAACAGTGGCTAGATGATAACGGAATCGGTCCCTCCAATAAGCATCCCGTCGGCTCTCTAGAATTCATCGAATTACAGAAGAGAAAGACCAAACTACTCTCCATGCTTGAAGAGGTTGAGAGGAGATACAGGCACTACTGCAACCAAATGAAGGTGGTGGTGTCGTCGTTTGAGGCGGTGGCAGGGGCCGGGGCGGCCAGGGTTTACTCGGCGTTGGCGTTGAAGGCGATGTCGAGGCATTTCAGGTGTTTGAAAGATGGGATATTGAGTCAAATAGAAGTAGCAAGAAGAGGAATGGGAGAGAAAGATCCCGTTGCACCAGGAACCACAAAAGGTGAAACGCCAAGGCTCAGAATCATAGACCAATCTCTCAGACAACAGAGAGCTTTCCAACAAATGAGCATGATGGAAACTCATCCATGGCGTCCCCAAAGAGGCCTTCCAGAACGATCCGTTTCAGTTCTTCGAGCTTGGCTCTTCGAGCATTTCCTTCATCCGTACCCAAGTGATATGGATAAACATATCTTAGCCCGCCAAACTGGTCTCTCAAGAAGCCAGGTATCAAACTGGTTTATTAATGCAAGAGTGAGGCTGTGGAAGCCAATGGTGGAAGAGATGTACTTGGAGGAAATCAAGGAGCATGAAAACAACATGGCTTCTTCTGAGGGTGTCACCGATCCCGCCGTCGACGATAACATGCTGGCCGTCGGCAGCTGGAACCTCGATAACCCGCCACTGACGACGCCACATCTTGTAGATCAGAAGCCGCTCCAGAACCACCGGTTGCTTCGAATAGACTCCGAGTGTGTGTCTTCTATCATAAACAACCACCCATTATCAGCAGATAACAAAAACGAATCCACCAAGAACAATAATAATCCCCATCATCAAGATCAATTTGGATCTGTGGAGCTTGATTTTTCATCTTACAACACTCACAACTCAGCTGGTGGCATGGTTTCTTACAGTAATGAGAATGGGAATAATAGTAATCAGAACTATAACAGTGGAGGAGGTGGCGGTGTTTCGTTGACGCTAGGGTTACAACAACACGGCGGAAGTGGGGTGAGTCTGGCGTTTCCTCAGCCATCTCAGGCATCACTGTTCTATCCAAGAGATCAAATGGAAGATTGTCAACCAGTTCAGTACTCGCTTTTGGACGGCGAAGCACAAAATCTTCCTTACAGAAATTTAATGGGTGCACAGTTACTCCATGACTTGGCAGGATAG 2082 0.4529 MVSSSAGFCYSEVSAPGNNPAAAIQTHMGNHRHHNQIQGFESHPDMYNLTTNMDMIGFSKNLHQQQQSDWKSFLGKPATHHHNPGPSSSSSKTTTMNNNNNEPGSTNFYQYNTKPDFTSNENLIVGEPHNHHHQQHNSSSTTWQDNRLLVDDSSLRCVFPCEGNEMPSQGLSLSLSSNNPLSIGLQSFELRHTNNNNQLHHHQNQSDFVSSTSSGDKLLLGKSSMNLLHQQQQEASGNLYQGHFLLKNSKYLVAAQELLNEFCSLGTKQSDLVKQKSSSTTQKNKQWLDDNGIGPSNKHPVGSLEFIELQKRKTKLLSMLEEVERRYRHYCNQMKVVVSSFEAVAGAGAARVYSALALKAMSRHFRCLKDGILSQIEVARRGMGEKDPVAPGTTKGETPRLRIIDQSLRQQRAFQQMSMMETHPWRPQRGLPERSVSVLRAWLFEHFLHPYPSDMDKHILARQTGLSRSQVSNWFINARVRLWKPMVEEMYLEEIKEHENNMASSEGVTDPAVDDNMLAVGSWNLDNPPLTTPHLVDQKPLQNHRLLRIDSECVSSIINNHPLSADNKNESTKNNNNPHHQDQFGSVELDFSSYNTHNSAGGMVSYSNENGNNSNQNYNSGGGGGVSLTLGLQQHGGSGVSLAFPQPSQASLFYPRDQMEDCQPVQYSLLDGEAQNLPYRNLMGAQLLHDLAG 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0981 693 SMART HOX_1 425 489 IPR001356 GO:0003677
Lele56g0981 693 CDD homeodomain 425 486 IPR001356 GO:0003677
Lele56g0981 693 ProSiteProfiles 'Homeobox' domain profile. 422 485 IPR001356 GO:0003677
Lele56g0981 693 SUPERFAMILY Homeodomain-like 426 491 IPR009057 -
Lele56g0981 693 MobiDBLite consensus disorder prediction 82 107 - -
Lele56g0981 693 FunFam BEL1-like homeodomain protein 4 428 490 - -
Lele56g0981 693 MobiDBLite consensus disorder prediction 273 296 - -
Lele56g0981 693 MobiDBLite consensus disorder prediction 273 291 - -
Lele56g0981 693 Gene3D - 428 490 - -
Lele56g0981 693 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 140 506 - -
Lele56g0981 693 SMART prehox3 240 374 IPR006563 -
Lele56g0981 693 Pfam Associated with HOX 246 372 IPR006563 -
Lele56g0981 693 Coils Coil 306 326 - -
Lele56g0981 693 Pfam Homeobox KN domain 442 481 IPR008422 GO:0003677|GO:0006355
Lele56g0981 693 MobiDBLite consensus disorder prediction 560 584 - -
Lele56g0981 693 MobiDBLite consensus disorder prediction 74 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0981 Lele-ChrLele56 11059346 11062152 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0981 146 692 Homeobox Transcription Factor Family AT5G41410 45.470 2.33e-135 409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Lele56g0981 POX 7.3e-47 No_clan