Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0978 ATGGCTCCTGAAGTTTTGAGGAATGAAAAGCTTGCTTTTGCTGCAGATATATGGTCTTTGGGATGCACTGTTATTGAAATGGCTACTAGTATGCCTTCTTGGGGTGCTTCTAGTAAGTATGATTCAAAGCCAATGGCTGTTATTTTCAAGATTGCATGTGGTGATGGGATACCTAAACTGCCACCCATTTCTCAAAGGCACCCATTTGTGGCAAGGGATTATTATTCATCTCTAACTGGAACAACACCACCACCATCTTCACCCAAAGAAGACACTGCTTCCTCGCCAGTCAGTGTGTTGTTGGGGATCTCAAGTTTTGATTATGCTTATGATTTGGTGGATGAACCAGAAAGCCCAGAGGAAAATGATTTTTGTGTCATAAACCCATTCACATGTTGTAAAGATGGATGA 411 0.4161 MAPEVLRNEKLAFAADIWSLGCTVIEMATSMPSWGASSKYDSKPMAVIFKIACGDGIPKLPPISQRHPFVARDYYSSLTGTTPPPSSPKEDTASSPVSVLLGISSFDYAYDLVDEPESPEENDFCVINPFTCCKDG 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0978 136 ProSiteProfiles Protein kinase domain profile. 1 136 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele56g0978 136 SUPERFAMILY Protein kinase-like (PK-like) 1 76 IPR011009 -
Lele56g0978 136 MobiDBLite consensus disorder prediction 75 95 - -
Lele56g0978 136 Pfam Protein kinase domain 1 50 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele56g0978 136 Gene3D Transferase(Phosphotransferase) domain 1 1 122 - -
Lele56g0978 136 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0978 Lele-ChrLele56 10937845 10938346 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0978 1 61 MAP Kinase Kinase Kinase AT1G63700 48.387 4.25e-11 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lele56g0978 Pkinase 7.4e-08 CL0016