Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0977 ATGAAAGGGAATGGATTATATCTCAAGGTTCTGCTTGGTTATGTTTCAGGGTTTTCCGCCACTGTATTGTCATTGGCTTTCTGGTTACACTTTAGTATTACTTTAGGTTTGACGGTGAATCTTCTATCTAGCATTAGAGCACTTTGGGGTGGCTATAGACTTGACCTAGGAAAAGGTTGTATTGGGGACTAAAGGAGCAGTATGGCCAGAGTTTCCACATCTGTATCTCCCAAGCGTGGGGAATGGGTGAAGGGGAAATTGGCACGATCAAGATCTTTTGGGACTGTTAATTTAGCCTTGAGCAAATTCACAGGAGGACTCTTTGTTCTTAAATCAGCATATACAAGGACTGAATTTGCGGCTTTAGAGAATGAGGTTGAAATTCTCAAGAATCTAGAACAATCTCCTTATATAGTCCGATACGTAGGGTCAGAAAGAGATGGAAATGATCTGAGTGTTCTAATGAAGTACGTGGCTCGGGGTAGTTTGGCTGATATTGCCAAGAAATTCTGCGGATCATTACAAGATGTGGTTCGTTTATACACAAAAGAAATCCTGGAAGGCCTCAAGTGTCTTCAAGGCATTGGGATTGTGCACTGTGAACTTAAGTGCAAAAACGTGCTCCTGGGGACATCGAATTGGCAGATTTTGGATGTGCAAGGAGGGTGGAGGACTTGA 678 0.4263 MKGNGLYLKVLLGYVSGFSATVLSLAFWLHFSITLGLTVNLLSSIRALWGGYRLDLGKGCIGDXRSSMARVSTSVSPKRGEWVKGKLARSRSFGTVNLALSKFTGGLFVLKSAYTRTEFAALENEVEILKNLEQSPYIVRYVGSERDGNDLSVLMKYVARGSLADIAKKFCGSLQDVVRLYTKEILEGLKCLQGIGIVHCELKCKNVLLGTSNWQILDVQGGWRT 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0977 225 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 73 218 - -
Lele56g0977 225 SUPERFAMILY Protein kinase-like (PK-like) 79 216 IPR011009 -
Lele56g0977 225 Pfam Protein kinase domain 92 217 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele56g0977 225 SMART serkin_6 82 219 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele56g0977 225 Gene3D Transferase(Phosphotransferase) domain 1 65 219 - -
Lele56g0977 225 ProSiteProfiles Protein kinase domain profile. 82 225 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0977 Lele-ChrLele56 10934540 10937771 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0977 72 219 MAP Kinase Kinase Kinase AT5G55090 39.869 8.20e-22 91.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lele56g0977 Pkinase 1.2e-16 CL0016