Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0972 ATGGTTGTGATTTGGGGACAAAGCCATGTAAATGAAAGCATGATAACAGGAGAAGCCAGGCCTGTGGCAAAGATGGGTGATACGGAAATTGGAGGCACTGTAAATGGTAACGGGGTTTTGCATGTGAAGGTGACAAGAGTTGGATCAGAGAGAGCCCATTCGCAGATTGTTCGAGTTGTTGAGTCAACTCAGAAGTCTAATGCTCCTGTTCAGAAGCTTGCAGACCGTATTTCCAAATACTTTGGGCCACTAGTAAATCACCAAGGTCTTTATTTTCTTATGCAGGTTATAATGCTTTCTCTTGCAACTTGGGTCTTTGAGCTTGCAGTTCAGTTTGGGATCTCTGTGATGGTCATAGCATGTACTTGTGCTTTAGGCCTAGCCACTCCTACCGCTGTTATGGTTGGTACTGGAGTTGGCGCAACTCAAGGCGTGTTGATCAAAGGTGGCCAAGCATTAGAAAAGGCACACAAGGTAAACTGCATTGTCTTTGATAAGACAGGAACTTTAACAGTTGGCAAACCAGTTATTACCACAAAGCTCTTCAAGAGGATAACACTTCAAGATTTCTACAAATTTGTTGTTGCAACTGAGGTGAACAGTGAACACCCAATAGCCAAGGCAGTTGTTGAACATGCTAAGAAAGCCATAGAAGATGACGAAACGAACCTTGCAAGGCCAGAAGCAAGTGACTTTGTTTCCATTTCCCCCCATGGAGTGAAAGTTATTGTTCAAGACAAGGAAATAATAGTTGGGAATAAGAAGTTTATGCAAGATCGTAACATAGTCATTCGAATGGATGCTGAAGAAACACTAGCAGAGGTTGAAAGGTTGGCACAAACTGGAATTCTAGTGTCCATAGATAGAGCAATTGATGGAGTCCTAGCAATATCTGATGCTTTGAAACCAAGTGCTAAAGAAGTCATTTTGTAG 933 0.4234 MVVIWGQSHVNESMITGEARPVAKMGDTEIGGTVNGNGVLHVKVTRVGSERAHSQIVRVVESTQKSNAPVQKLADRISKYFGPLVNHQGLYFLMQVIMLSLATWVFELAVQFGISVMVIACTCALGLATPTAVMVGTGVGATQGVLIKGGQALEKAHKVNCIVFDKTGTLTVGKPVITTKLFKRITLQDFYKFVVATEVNSEHPIAKAVVEHAKKAIEDDETNLARPEASDFVSISPHGVKVIVQDKEIIVGNKKFMQDRNIVIRMDAEETLAEVERLAQTGILVSIDRAIDGVLAISDALKPSAKEVIL 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0972 310 Gene3D - 1 64 - -
Lele56g0972 310 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 2 309 - -
Lele56g0972 310 SUPERFAMILY Calcium ATPase, transduction domain A 2 60 IPR008250 -
Lele56g0972 310 Pfam haloacid dehalogenase-like hydrolase 159 309 - -
Lele56g0972 310 PRINTS P-type cation-transporting ATPase superfamily signature 293 304 - -
Lele56g0972 310 PRINTS P-type cation-transporting ATPase superfamily signature 163 177 - -
Lele56g0972 310 PRINTS P-type cation-transporting ATPase superfamily signature 11 25 - -
Lele56g0972 310 Gene3D - 154 309 IPR023214 -
Lele56g0972 310 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 165 297 IPR023299 GO:0000166
Lele56g0972 310 Pfam E1-E2 ATPase 2 141 - -
Lele56g0972 310 Gene3D - 174 301 IPR023299 GO:0000166
Lele56g0972 310 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 1 309 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele56g0972 310 ProSitePatterns E1-E2 ATPases phosphorylation site. 165 171 IPR018303 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0972 Lele-ChrLele56 10778097 10779959 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0972 3 309 Primary Pumps ATPases AT1G63440 67.812 1.73e-138 414