Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0963 ATGGGAATAGCATTACAGGAAACTAATTCAGAGATTCTAAAGCTTACCCCACTGCCACATGATTCGGCCATCTGCAAAAGGCGTCTGAGTTTGAGTTACAACAAAGTTTGTATATTTTTCACTAATCTCAGTAAATGCATGGATGGGAGTGAAGCTATGGCATTCTCTGGTGGCTCAGCTCCTTATTACATGCGTAGAGGAAATATTTCTGGGTCTGGCTCTGGAACACTAGCCCAGGGGTTCCAACAATCACCTCCTGGGTATAGACCTTTGTCAAACGTTGGCTTTCAAGCTCAGCCGAATGTCCGAGGTGGTTCTGTGGGTTCCACATTTTCAGTAGAGCCTCCTCGTAGCAATTTTAGTCCAGGCATTAATATAAGTTCCTCTACCGGAGTACCTTCTTCAGGAGAACCCTTGAAAAAAAAGAGAGGAAGACCTCGTAAATATGGTCCTTATGGCCCTGTCTCTCTGGGACTTTCTCCCATGTCTGTAACTGCTAATTCTACCCCAGGTTCAGGCACACCTTCCCTGAAACGGAATAGAGGACGTCCACCTGGTTCTGGCAGGAAGCAGCAACTAGCGGCTCTAGGTGAATGGATGAACAATTCAGCGGGACTTGCTTTTGCACCTCATGTTATCACCATTGGAGCTGGGGAGGACATTGTAGCAAAGTTATTGTCTTTATCACAGCAGAGACCAAGGGCTCTGTGCATCATGTCAGGCACTGGCACAGTTTCTTCTGTCACTCTACGCCAACCAGCCTCAACAAACATCAGTGTCACTTATGAGGGCCGATTTCAAATTTTATGCTTGTCTGGCTCATACTTGGTTGCTGAAGATGGTGGACCTTGTGATAGAACAGGGGGTTTGAGTGTCTCTCTTTCTAGTCACGATGGTCAAGTTATTGGTGGTGGTGTTGCTGTGCTTATCGCGGCAAGCCCAGTTCAGGTGGTAGTGTGCAGTTTTGTATATGGAAGCGCTAAGATGAAGACGAGGCAAGTAACCTCTCCCAAGAGTGAGAAGAATTCTGAGACTCAAGCTCAGGCTCAGGCGCAGCATGATGGTAACAAGTTAAATAGCCCTATTACTCCAGCAAGTGCTCAAAACTACACATTGTCTGCATCAGCCATGTGGCCAGGAGATCTACAAAGCTCACACACACATACTCATACTGGTATCGACTTGACTCGGGGATGA 1197 0.4678 MGIALQETNSEILKLTPLPHDSAICKRRLSLSYNKVCIFFTNLSKCMDGSEAMAFSGGSAPYYMRRGNISGSGSGTLAQGFQQSPPGYRPLSNVGFQAQPNVRGGSVGSTFSVEPPRSNFSPGINISSSTGVPSSGEPLKKKRGRPRKYGPYGPVSLGLSPMSVTANSTPGSGTPSLKRNRGRPPGSGRKQQLAALGEWMNNSAGLAFAPHVITIGAGEDIVAKLLSLSQQRPRALCIMSGTGTVSSVTLRQPASTNISVTYEGRFQILCLSGSYLVAEDGGPCDRTGGLSVSLSSHDGQVIGGGVAVLIAASPVQVVVCSFVYGSAKMKTRQVTSPKSEKNSETQAQAQAQHDGNKLNSPITPASAQNYTLSASAMWPGDLQSSHTHTHTGIDLTRG 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0963 398 MobiDBLite consensus disorder prediction 103 191 - -
Lele56g0963 398 ProSiteProfiles PPC domain profile profile. 205 343 IPR005175 -
Lele56g0963 398 MobiDBLite consensus disorder prediction 331 364 - -
Lele56g0963 398 Pfam Plants and Prokaryotes Conserved (PCC) domain 210 323 IPR005175 -
Lele56g0963 398 MobiDBLite consensus disorder prediction 160 176 - -
Lele56g0963 398 SUPERFAMILY AF0104/ALDC/Ptd012-like 208 327 - -
Lele56g0963 398 MobiDBLite consensus disorder prediction 103 135 - -
Lele56g0963 398 Gene3D - 210 342 - -
Lele56g0963 398 CDD DUF296 210 322 IPR005175 -
Lele56g0963 398 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 113 368 IPR039605 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0963 Lele-ChrLele56 10565911 10571202 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0963 47 398 AT-hook Motif Nuclear Localized (AHL) Family AT1G63470 49.354 6.08e-95 287