Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0952 ATGTGTTGGGAGAAGACGTCATCACAAGGACTTTGGATCAGACCATCTCCACAAGATGACCAAGAACCAGTAGGAAGCTCCTTCGTACTCTTACCTTGAGATGGCTGCAGAATTTGCAATTCCAATGAGGTTTTGAGGTGTGAAAAGCCTGAAGAACAAGAGGGTCTATGTCGGTGGAAAATAGAGGGATTGGTAGACAACACCATCATGCACATTGACATTGCAAAGCAACAAAATAAGGGAGCACTGCTTCTCCTAAAAAGATCCGCCATGTTCATCTCCAGTAATGATAGCAACAACGGCATCATCCAGATCCTCCATATCCACCATGTTCCAGATTCAACAGAAAAGGAAGAAGAAGAAGTTTTAGAGGAGAAGCGACGGTTCATTATGGGTTGTGATTTTTCCAAGCTTTCATCATGCTGCTCGGGCATAGAGCAAAGAGGTCCATTACCTGATGTCAATGTTGACGGAATTGAAAAGAAAAGTGAGACCACTCATGATGTGCCATCATTTCAAGAATACACAATTCATCAGCTCATGAAGGCTACTTCTGGATTTGCTGTTGAAAATATAGTTTCTGAACAAGGATTAAATGCTCCAAATGTGGTTTATAAAGGAAAAATAGAAAATGAAACACTAATTGCTGTCAAACGGTTTGATAAAAATGCTTGGCCTGATGCACGACAATTTTCAAATGAAGCCAAGGCAATTAGTCATCTAAGGAACGAAAGATTGGTTAGTCTACTTGGATGCTGCAGTGATGGTGATGAGAGGTTACTTGTTGCAGAATATATGCCCAATGATACTTTGGCAACTCACTTGTTCCATTGGGAAACTCAGCCCATGAAATGGACAATGCGACTGAGAGTTGCTCTATACATTGCCCAAGCGCTGGAATACTGTGCAAGCAAAGGACGTGCTCTATATCATGATCTAAATGCTTATAGAGTACTTTTTGATTATGAAGGAAATCCAAGACTCTCATGCTTTGGTTTGATGAAGAACAGTCGAGATGGTAAAAGTTATAGTTCAAACTTGGCATTTGCTCCACCTGAATATCTAAAGATAGGTAGAATTACTCCAGCAAGTGTGACATATAGTTTTGGAACCATTTTGCTGGACCTTCTTACTGGAAAACACATTCCTCCAAGCCATGCACTTGACCTGATTCGGGAGAGGAACCTTGAGATGTTAACAGATTCTTGTTTAGAAGGACAATTTTCAAATGATGAAGGAACTGAATTGGTACACTTAGCCTCGCAGTGTTTACAATTAGAACCGCAGGAGCGTCCTCATCCAAATTCATTGGTTACTGCTTTAATACCCCTACAAAAGGATTCCGAGGTTCCTTCTCATGCTTTGATGGGTATGCCAGATTATGATACTACTCCATCCCTTTCACCACTTGCTGAAGCTTGTCTGAGAATTGATTTGGCTGCAATCCATGAGTTCCTTGAAAAACTTGGGTATAAAGATGACGAGGGTACTTCTACTGAGATGCATAAAACATTGAACTCAAAGAAGAAAGGTGACGCTGCCTTTAGCCATAAAGACTTTAGCACCGCGATTGGTAGTTATACACAGTTCATTGATGCTAGAAACATGGTTTCTCCAACAGTTTATGCACGCCGCAGCCTATCTTATCTCATGAAGAAAATGCCAGAAGAAGCATTGAAGGATGCATTGCAAGCACTAAGAATTTCCCCTATCTGGTACATTGCATTCTACTTACAAGCTATGGCACTTCTTGCATTGGGGCAAGAGAAAGAGGCCTTTGTGGCTCTTGAAAAGGGTTCTTCACTTGAAAGTAAAAGGGAGTGGATGGTACTTCCTTGTGTATGGGTGCTTCATTGGTCTCCAAGGAGAATTATTTTGTAA 1881 0.411 MCWEKTSSQGLWIRPSPQDDQEPVGSSFVLLPXDGCRICNSNEVLRCEKPEEQEGLCRWKIEGLVDNTIMHIDIAKQQNKGALLLLKRSAMFISSNDSNNGIIQILHIHHVPDSTEKEEEEVLEEKRRFIMGCDFSKLSSCCSGIEQRGPLPDVNVDGIEKKSETTHDVPSFQEYTIHQLMKATSGFAVENIVSEQGLNAPNVVYKGKIENETLIAVKRFDKNAWPDARQFSNEAKAISHLRNERLVSLLGCCSDGDERLLVAEYMPNDTLATHLFHWETQPMKWTMRLRVALYIAQALEYCASKGRALYHDLNAYRVLFDYEGNPRLSCFGLMKNSRDGKSYSSNLAFAPPEYLKIGRITPASVTYSFGTILLDLLTGKHIPPSHALDLIRERNLEMLTDSCLEGQFSNDEGTELVHLASQCLQLEPQERPHPNSLVTALIPLQKDSEVPSHALMGMPDYDTTPSLSPLAEACLRIDLAAIHEFLEKLGYKDDEGTSTEMHKTLNSKKKGDAAFSHKDFSTAIGSYTQFIDARNMVSPTVYARRSLSYLMKKMPEEALKDALQALRISPIWYIAFYLQAMALLALGQEKEAFVALEKGSSLESKREWMVLPCVWVLHWSPRRIIL 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0952 626 SUPERFAMILY Protein kinase-like (PK-like) 166 449 IPR011009 -
Lele56g0952 626 Gene3D Tetratricopeptide repeat domain 480 609 IPR011990 GO:0005515
Lele56g0952 626 MobiDBLite consensus disorder prediction 5 26 - -
Lele56g0952 626 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 160 607 IPR045845 GO:0004672|GO:0009742
Lele56g0952 626 SMART tpr_5 573 606 IPR019734 GO:0005515
Lele56g0952 626 SMART tpr_5 539 572 IPR019734 GO:0005515
Lele56g0952 626 ProSiteProfiles Protein kinase domain profile. 190 456 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele56g0952 626 Gene3D Phosphorylase Kinase; domain 1 160 265 - -
Lele56g0952 626 FunFam probable serine/threonine-protein kinase At5g41260 267 458 - -
Lele56g0952 626 MobiDBLite consensus disorder prediction 5 23 - -
Lele56g0952 626 Pfam Protein tyrosine and serine/threonine kinase 204 440 IPR001245 GO:0004672|GO:0006468
Lele56g0952 626 SUPERFAMILY TPR-like 508 607 IPR011990 GO:0005515
Lele56g0952 626 FunFam probable serine/threonine-protein kinase At4g35230 162 265 - -
Lele56g0952 626 Gene3D Transferase(Phosphotransferase) domain 1 267 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0952 Lele-ChrLele56 10281772 10294371 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0952 160 481 Glycoside Hydrolase AT3G07070 34.286 1.64e-43 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Lele56g0952 PK_Tyr_Ser-Thr 1.1e-26 CL0016