Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0947 ATGGAAGAAACAAGCTTTAAAGTTAGACGTTACAGTGCCCACGAAAGGAAAGAGAGAATCTCTAAATACAGGGCCAAGAGAAGACAGAGGAACTTCAACAAAACCATCAAGTATACTTGCAGAAAGACACTTGCTGATAACAGACCTCGTATACGTGGAAGATTCGCAAGAAACGATGAGACCATTGAGATCGCGAATCCGATGATTGAAGGATTTAATGAAAAGCTAGAGGATGAAACAGTGAGAGCACAACAGTATGGGAATAGCTTCGGAGCTTACTCAGAGTTTCAGTACTATGGGGTTTGA 306 0.415 MEETSFKVRRYSAHERKERISKYRAKRRQRNFNKTIKYTCRKTLADNRPRIRGRFARNDETIEIANPMIEGFNEKLEDETVRAQQYGNSFGAYSEFQYYGV 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0947 101 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 7 78 IPR045281 GO:0009909
Lele56g0947 101 Pfam CCT motif 16 58 IPR010402 GO:0005515
Lele56g0947 101 ProSiteProfiles CCT domain profile. 16 58 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0947 Lele-ChrLele56 9898199 9898818 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0947 12 61 C2C2-CO-like Transcription Factor Family AT5G57660 52.000 2.31e-13 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele56g0947 CCT 4e-18 CL0281