Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0943 ATGAGGTTATGGAATTCATTGTTGTTTATCGGTCTGATTTCCACGGTCTCTTTTGTGGCTTGTGATAATGCTGTGGCATCCAAAGAAGTTTTGGCGCTTAGTGCTTTCAAAGAAGCTATTTATGAAGATCCATTTCAAGTTTTGTCCAATTGGAATACGATGGATTCAGATCCTTGTGACTGGGATGGCGTTTTCTGCAATCTGGTCCGAGATCATGTTGTTAAGCTAAACATTTCTAGATCATCATTAAAGGGATTTCTAGCACCAGAATTGGGACGAATCACGTACTTAGAAGAATTGATTTTGCACGGCAATAAACTGATTGGAACAATACCCAAAGAGCTGGGCATGTTGAAATCTCTTAAGGTCTTGGATTTGGGGATGAATCGACTATCAGGACCAATTCCTCCAGAGATTGGAAATTTAACCCAATTAGTGAAAATAAACTTGCAATCCAACGGGTTGACTGGTAGACTAGATCCAAATCTTGGAAATTTGAAATACCTTCAAGAATTGAGGCTGGATAGGAATAAGCTTCAAGGGCCTGTGCCTGCCGATAGCAGTTCCGACTTTACTACAAATATGCGTGGAATGTATGCATCCAATGTGAATTTAACTGGTTTCTGTCGTTCATCTCTGTTGAAAGTAGCTGATTTTTCCTATAACTTCTTTGTTGGTAGCATCCCGAAATGCTTGGGATATCTTCCAAGGTCTAGCTTTCAAGGGAATTGCCTCCGGATCAAGGATTTAAAACAACGCCCTTCTGTGCAATGTGCTGGTGCATCACCTGCCAGGGGCCATCCAGTGATCAACCCAAAGCAACGATCAGCTGATTATTTGTCCAAGCATCAAGGAGAATCAAAACCTACTTGGCTTTTGGCTTTAGAAATAGTGACAGGAACCATGATTGGTTCTCTCTTTTTAGTTGCTCTTCTAACTGCTTTTCAGAAGTTTAACAACAAATCGTCCATCATTACTCCTTGGAAGAAATCTGCAAGCGAGAAGGATAATTTGACAGTATATATAGACTCTGAGATGTTGAAAGATGTAAAGAAGTATAGCAGACAAGAGCTCGAAGTGGCTTGTGAAGATTTCAGCAACATCATTGGCTCCTCGCCTGACAGTGTGGTCTACAAGGGCACCATTAAAAGTGGGCCTGAGATTGCTGTAATTTCCCTCTGCATTAAGGAGGAGAATTGGACAGGTTACCTCGAGCTCTATTTTCAGAGAGAGGTGGCAGACTTGGCGAGGCTAAATCATGAGAATATAGGAAAGCTACTAGGATATTGTAAAGAGAGCACTCCATTTACAAGGATGCTGGTTTTTGAATATGCTTCAAATGGGACACTTTCAGAGCACCTAAGTTATGGAGAAGGATGCCAGTTATCATGGACAAGGCGTATGAATATTGTCATAGGCATTGCACGCGGTCTCAAATATCTACACACAGAAGTTGAGCCTCCATTCACTATATCGGAGCTAGATTCTGTTGCTGTATACTTAACAGAAGATTTTGCCCCAAAGCTCGTTGATTTTGAAAGCTGGAAGACAATCCTGGAAAGGTCAGAAAGAAATTCTGGTTCTGTTGGCAGCCAAGGTGCCATTTGCGTTCTTCGAAATTCCATTGAAGCTCGCCATCTTGATACCCAAGGAAACATATATGCTTTTGGGCTACTTCTACTTGAGATAGTCAGCGGAAGATCTCCCTATTGCAAGGACAAGGGTTGCTTGGTGGACTGGGCGAAGGACTATCTTGAAAATCCAGACGAAATGCCATCTTTGGTGGATCCTGAATTGAAACATTTTAGAGATGAAGACCTGAAAGTAATATGTGAGGTAATAAATCTCTGTATCAATTCTGACCCCACAAGGCTTCCAGGGACGCAAGAGTTGTGTAGTATTCTGGAGAGCACAATCGACACATCTATAACTTCGGAGCTCAAGGCATCATCTTTGGCTTGGGCTGAACTTGCACTCTCATCTTGA 1986 0.4194 MRLWNSLLFIGLISTVSFVACDNAVASKEVLALSAFKEAIYEDPFQVLSNWNTMDSDPCDWDGVFCNLVRDHVVKLNISRSSLKGFLAPELGRITYLEELILHGNKLIGTIPKELGMLKSLKVLDLGMNRLSGPIPPEIGNLTQLVKINLQSNGLTGRLDPNLGNLKYLQELRLDRNKLQGPVPADSSSDFTTNMRGMYASNVNLTGFCRSSLLKVADFSYNFFVGSIPKCLGYLPRSSFQGNCLRIKDLKQRPSVQCAGASPARGHPVINPKQRSADYLSKHQGESKPTWLLALEIVTGTMIGSLFLVALLTAFQKFNNKSSIITPWKKSASEKDNLTVYIDSEMLKDVKKYSRQELEVACEDFSNIIGSSPDSVVYKGTIKSGPEIAVISLCIKEENWTGYLELYFQREVADLARLNHENIGKLLGYCKESTPFTRMLVFEYASNGTLSEHLSYGEGCQLSWTRRMNIVIGIARGLKYLHTEVEPPFTISELDSVAVYLTEDFAPKLVDFESWKTILERSERNSGSVGSQGAICVLRNSIEARHLDTQGNIYAFGLLLLEIVSGRSPYCKDKGCLVDWAKDYLENPDEMPSLVDPELKHFRDEDLKVICEVINLCINSDPTRLPGTQELCSILESTIDTSITSELKASSLAWAELALSS 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0943 661 Pfam Leucine rich repeat N-terminal domain 27 67 IPR013210 -
Lele56g0943 661 SUPERFAMILY Protein kinase-like (PK-like) 341 635 IPR011009 -
Lele56g0943 661 Pfam Leucine rich repeat 96 155 IPR001611 GO:0005515
Lele56g0943 661 Gene3D Transferase(Phosphotransferase) domain 1 445 652 - -
Lele56g0943 661 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 26 189 - -
Lele56g0943 661 Pfam Protein tyrosine and serine/threonine kinase 367 572 IPR001245 GO:0004672|GO:0006468
Lele56g0943 661 Gene3D Ribonuclease Inhibitor 26 257 IPR032675 -
Lele56g0943 661 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Lele56g0943 661 PANTHER PROTEIN MALE DISCOVERER 2 18 659 - -
Lele56g0943 661 FunFam Inactive receptor-like serine/threonine-protein kinase 337 444 - -
Lele56g0943 661 ProSiteProfiles Protein kinase domain profile. 363 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele56g0943 661 Gene3D Phosphorylase Kinase; domain 1 337 444 - -
Lele56g0943 661 SUPERFAMILY L domain-like 28 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0943 Lele-ChrLele56 9591650 9596209 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0943 42 640 Receptor kinase-like Gene Family AT5G45780 28.361 2.10e-57 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Lele56g0943 PK_Tyr_Ser-Thr 1.1e-17 CL0016