Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0932 ATGGGCTTCAACTGTAACTTACAGATTTCCATCCTCAGCATTGCATACTCTTCCAGATCTATTGAGGAGAGGTCGTCAACCAAAGAAAAAATGTTGATGGCAATGGAGGCTAGGGGTGAAGGAGGTTGCATATCAATAGAGGAAGAAGAAACTAGCAACAAAATATTAACTCCTCGTAACCCCACCTTTCTCTTTTGTCGGAAGGAGTGGCATAATCACCTAGACCCAGCTATAAAGAAAGATGCATGGACAGAGGAGGAGGAATCCATGCTTGCTTTCTGTCACCAAATATACGGTAGTAAGTGGTCAGAAATTGCAAGGTTTCTTCCTGGAAGGACTGATAATGCTATTAAAAATTATTGGAACTGTTCAATGAAGAAGAAGTTGGACACATCCTCACCTAGATGTGATGCAGATATTGTGGCCTGGGATTTCAATACTTGTAGAATCAATATATTGAAGCGCAATATTGATTCCTCCTTAACTGAATTGACTCTTGGCATGCCACAAGATGAGAGCAGATTGATCTACTCAACAAAAGGGATAAGCTCTAAGAAAGGAGTTGTCAACAAACCCTTAACTTGCTTTGATGTTCCTCCACTGGGGCTTGCTGCTGAACTAGATTGTGTCACTAATGAGATTTGTATGTCTCCCGATCTGCTCAAGTCTTGTTCAGATGCAAAGCTCTTCGGGGATGGCGAATGTTGCAGTCCACTTTCGAGCCGACCAGTATTCGCTAGTTACGAGGAGAATGCTCAAGTTGAACTGAGAAATAAAAGAAACAGGGTTCAAAGTCAAAACTTGTGTCCTGCAAAGTTATCTCTGGTGGAAGATTTGGCTTCCCCATAA 849 0.4193 MGFNCNLQISILSIAYSSRSIEERSSTKEKMLMAMEARGEGGCISIEEEETSNKILTPRNPTFLFCRKEWHNHLDPAIKKDAWTEEEESMLAFCHQIYGSKWSEIARFLPGRTDNAIKNYWNCSMKKKLDTSSPRCDADIVAWDFNTCRINILKRNIDSSLTELTLGMPQDESRLIYSTKGISSKKGVVNKPLTCFDVPPLGLAAELDCVTNEICMSPDLLKSCSDAKLFGDGECCSPLSSRPVFASYEENAQVELRNKRNRVQSQNLCPAKLSLVEDLASP 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0932 282 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 75 129 IPR017930 -
Lele56g0932 282 Pfam Myb-like DNA-binding domain 80 122 IPR001005 -
Lele56g0932 282 PANTHER MYB PROTEIN-RELATED 62 212 - -
Lele56g0932 282 Gene3D - 81 140 - -
Lele56g0932 282 ProSiteProfiles Myb-like domain profile. 75 125 IPR001005 -
Lele56g0932 282 CDD SANT 82 122 IPR001005 -
Lele56g0932 282 SUPERFAMILY Homeodomain-like 64 132 IPR009057 -
Lele56g0932 282 SMART sant 79 127 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0932 Lele-ChrLele56 9013596 9015230 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0932 66 130 MYB Transcription Factor Family AT5G02320 69.231 1.50e-27 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele56g0932 Myb_DNA-binding 6.8e-13 CL0123