Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0927 ATGGGCAAGGCATCCAAATGGTTTCGCTCTGTTTTTGGTCTCAAGAAGTCAGAATCTCCGTCTTCACAGGCGCTGTCTCCGTCCACTCTACACCCTGGCTTAGCTTCAAAACCACTCAAAGACAAACGCCGGTGGAGCTTCGTCAAATCTTACAGAGAATCAGGCACTACTAAATCCTCCGACGTTCACCACACAGCGTTCAGAGTGGAAGCGGTTCCATCGTCCGGGCACATCGACGGCGTGTACCCTGACAAGCACGTAATGACGGTTGCTGCTGCTAAGGCTGCTGTTGCGGAAGCTGCCGCCGCCGCTTTCAGACTTACGAGCAGCGGCTGGTGCCCTGAGAGCTTCGGGACTCGGGAGGAATGGGCAGCCATCAAAATTCAAGCCGCTTTTCGAGGCTGTTTGGCACGTGTCCGTGCTGGGCGAGTACCAATTCTACAGACACCATTTTCAAATTCTAAGTCATCTAGAGCAGACTACAATGGACCAGCAACACCAGACAAATTGGAAAGCCCGATCAGATCCAAGAGCATGAAATTTGATCATTCATCATCATTCAAGGCACGTGTCCGTGCTGGGCGAGTACCAATTCTACAGACACCATTTTCAAATTCTAAGTCATCTAGAGCAGACTACAATGGACCAGCAACACCAGACAAATTGGAAAGCCCGATCAGATCCAAGAGCATGAAATTTGATCATTCATCATCATTCAAGAGAAATGCGTCCAAGTCCCATCTTCAGATCCATGGTGGGAATCAAGATAAATGTTGGGATGACGATAAAAGCAATAGGATTCTCGAGATTGATTCTGGAAAACAACACTTCACTCCACCAACACGCCGAAACCTCTTTACCTCCATTAACTATCCTTCAGTATGTGATAATCACAGCCAAAGTTTCTCTTCTACAAAGGACTCGAAAACTCATCAATCGGGTCATAGCATGGACAATGGCCTCAAAAATAGTAGTAGTCCTTTTGCACCTAGCAGAAGCGACGACTCGAGAAGCTGTCTGAGTTCTTATTCTGACTACCCAAGCTACATGGCTTACACTGAATCTTCAAAGGCAAAGGTCAGATCAATGAGTGCTCCAAAGCAAAGGCCTCATCAATATGAGAGGTCTAGTTCATCTAATAGGTATTCAGTTCAAGGATTGACAACGCAGAGAGAAAATACATTGCACGCAAACTTCACTAGCAAAGCCTATCCAGGTTCTGGTCGTTTGGACAAGCTTGGTATGCCAGTGGGATATAGATTCTGA 1266 0.4676 MGKASKWFRSVFGLKKSESPSSQALSPSTLHPGLASKPLKDKRRWSFVKSYRESGTTKSSDVHHTAFRVEAVPSSGHIDGVYPDKHVMTVAAAKAAVAEAAAAAFRLTSSGWCPESFGTREEWAAIKIQAAFRGCLARVRAGRVPILQTPFSNSKSSRADYNGPATPDKLESPIRSKSMKFDHSSSFKARVRAGRVPILQTPFSNSKSSRADYNGPATPDKLESPIRSKSMKFDHSSSFKRNASKSHLQIHGGNQDKCWDDDKSNRILEIDSGKQHFTPPTRRNLFTSINYPSVCDNHSQSFSSTKDSKTHQSGHSMDNGLKNSSSPFAPSRSDDSRSCLSSYSDYPSYMAYTESSKAKVRSMSAPKQRPHQYERSSSSNRYSVQGLTTQRENTLHANFTSKAYPGSGRLDKLGMPVGYRF 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0927 421 Pfam IQ calmodulin-binding motif 123 140 IPR000048 GO:0005515
Lele56g0927 421 MobiDBLite consensus disorder prediction 239 260 - -
Lele56g0927 421 MobiDBLite consensus disorder prediction 16 37 - -
Lele56g0927 421 PANTHER IQ-DOMAIN 5-RELATED 1 138 - -
Lele56g0927 421 MobiDBLite consensus disorder prediction 16 30 - -
Lele56g0927 421 MobiDBLite consensus disorder prediction 355 383 - -
Lele56g0927 421 ProSiteProfiles IQ motif profile. 121 150 IPR000048 GO:0005515
Lele56g0927 421 Pfam Protein of unknown function (DUF4005) 317 386 IPR025064 -
Lele56g0927 421 MobiDBLite consensus disorder prediction 299 339 - -
Lele56g0927 421 MobiDBLite consensus disorder prediction 201 224 - -
Lele56g0927 421 MobiDBLite consensus disorder prediction 369 383 - -
Lele56g0927 421 MobiDBLite consensus disorder prediction 152 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0927 Lele-ChrLele56 8814171 8819555 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0927 122 421 IQD Protein Family AT4G23060 35.693 9.20e-36 135