Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0912 ATGGTGACGAAGGCCATCCTGGTCACCGGTGGAGCCGGTTACATTGGCTCCCACACCGTTCTCCAGCTCTTGCTCGGCGGTTTTACGGTCGTCGTCGTCGACAATCTTAATAATTCTTCTGAGATTGCTATGAAAAGAGTCAGGGAGCTCGCCGGCGAATTCGGGAATAATCTTTCCGTTCACAAGGTAGACCTCCGGGACAGAGCTGCACTTGAAGAAATTTTTGATTCCACACAATTTGGTGCTGCCATACATTTTGCGGGATTAAAAGCAGCAGATAGCATGGAAGGAATCTTGTGTTCTCATCTTCAGCAACTGTATATATATGGTTGTCCCAAGGAGCTTCCATGTACAGAAGAGTCTCCGCTCTCTGCATTGAACCCATATGGACGAACCAAGCTTGCCATTGAGGAAATTTGCCGTGATGTCTACTGGGCAGATTCAGAATGGAAAATAATATTGTTGAGATACTTCAACCCTGTTGGTGCTCATCCCAGTGGCTATATTGGTGAGGATCCTCATGGAATTCCAAATAATCTCATGCCATTTGTTCAAATAGCAGTTGGCAGACGCCCTGCACTGACAGTGTTTGGAAATGATTATAATACAGTTGATGGCACTGGGGTGCGTTATTATATTCATATTGTTGATTTAGCAGATGGGCATGCTTATGCATTGCGTAAACTAGATGATCCTAATATAGGTTGTGACGTGTATAATTTAGGAACAGGAAAGGGAACATCAGTGTTAGAGATGGTTAAAGATTTTGAAAAGGTCTCTGGAAAGAAAATTCCACTTGTGATGGCTGGCCGGAGACCTGGTGATGGTGAAATTGTTTATGCATCAACAGAAAAAGCAGAAAGAGAACTTAAATGGAATGAAGTTGGAGATTATGATACGTGGTATGAGCTTGGGAGGCAACCAGCAAACACTAAGCTATCAAGCAACAAAGCAGTGAGGAGAATCAGGGTTCGAGGTGGGAATGTTAAGTGGCGTGCTTTGAGGCTTGATACTGGAAATTACTTAAGGGGCAGTGAAGCTGTTGATGCTGCACCTTTCAAGCAGTGGTATCTCCAACATTATGGTGTTGACATCAGTCGCAAGAAGAAGACTGCAACTTCTTCCAAGAAGGAAGGTGAGGAAGGTGAAACTGTAACTGAGGAAGTGAAAAAGAGCAAACACGTATTGAGAAAGCTACAGAACAGAACCGGATGCTTGATCCTCATATTGAAGAACAATTTGGAGGTGGTCGTCTATTGGCTTGCATGTCCTCGCGACCTGGTCAATGTGGTCGTGCTGATGGATGAAACAGATGCTTCTTGTTGCCAAGGTAAAGAACTGGAATTCTACATGAAGAAGATTCAAAGGAAGAAGAGCAAGGGTGCAGGTGCTGCCTAA 1398 0.4421 MVTKAILVTGGAGYIGSHTVLQLLLGGFTVVVVDNLNNSSEIAMKRVRELAGEFGNNLSVHKVDLRDRAALEEIFDSTQFGAAIHFAGLKAADSMEGILCSHLQQLYIYGCPKELPCTEESPLSALNPYGRTKLAIEEICRDVYWADSEWKIILLRYFNPVGAHPSGYIGEDPHGIPNNLMPFVQIAVGRRPALTVFGNDYNTVDGTGVRYYIHIVDLADGHAYALRKLDDPNIGCDVYNLGTGKGTSVLEMVKDFEKVSGKKIPLVMAGRRPGDGEIVYASTEKAERELKWNEVGDYDTWYELGRQPANTKLSSNKAVRRIRVRGGNVKWRALRLDTGNYLRGSEAVDAAPFKQWYLQHYGVDISRKKKTATSSKKEGEEGETVTEEVKKSKHVLRKLQNRTGCLILILKNNLEVVVYWLACPRDLVNVVVLMDETDASCCQGKELEFYMKKIQRKKSKGAGAA 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0912 465 Pfam GDP-mannose 4,6 dehydratase 7 91 IPR016040 -
Lele56g0912 465 Pfam GDP-mannose 4,6 dehydratase 108 294 IPR016040 -
Lele56g0912 465 Gene3D - 99 164 - -
Lele56g0912 465 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 295 IPR036291 -
Lele56g0912 465 Gene3D Ribosomal protein S8e, subdomain 353 407 IPR042563 -
Lele56g0912 465 Gene3D - 165 215 - -
Lele56g0912 465 Gene3D - 216 303 - -
Lele56g0912 465 PANTHER UDP-GLUCOSE 4-EPIMERASE 108 294 - -
Lele56g0912 465 Pfam Ribosomal protein S8e 301 348 IPR022309 -
Lele56g0912 465 Gene3D - 307 352 - -
Lele56g0912 465 Gene3D - 2 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0912 Lele-ChrLele56 7922561 7932654 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0912 302 465 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 52.000 2.02e-39 139