Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0889 ATGAATCTTTCTTGGTCCCTCTTCACCAATGGATTCCTACTCATTGTTCTTTATTTTCTCTTCTTCAGTGACTCTGGCGCAAAGATCGTAACCCTTGATGTTCACAAAGCCAAGAATCTGATCCAAAATGGCAATCATGTTTATCTCGATGTCAGGAGGGTGGAAGATTTCCAGAAAGGACATGTCGATGCAGATAAGATCATTAACATTCCTTACCTGCTTCATACACCAAGTGGTAAGGTGAAGAACCCAGAATTTCTTAAGCAGGTTTCACGTGCTTGCGACAAAGAAGATCACATTATTGTGGGTTGCGATTGTGGGGTGAAATCTCTATATGCAACTGCTGATCTTCAGGCTGATGGTTATAAGGACGTGAAGAATATGGAAGGAGGTTATAGGGATTGGGTTAAGAACAGCTTTCCTGTGAAACCACTTGCTGTCAATCAGGAATACCGAACACACCAGTGA 468 0.4209 MNLSWSLFTNGFLLIVLYFLFFSDSGAKIVTLDVHKAKNLIQNGNHVYLDVRRVEDFQKGHVDADKIINIPYLLHTPSGKVKNPEFLKQVSRACDKEDHIIVGCDCGVKSLYATADLQADGYKDVKNMEGGYRDWVKNSFPVKPLAVNQEYRTHQ 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0889 155 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 11 144 IPR036873 -
Lele56g0889 155 ProSiteProfiles Rhodanese domain profile. 42 144 IPR001763 -
Lele56g0889 155 CDD RHOD 37 136 - -
Lele56g0889 155 SMART rhod_4 32 141 IPR001763 -
Lele56g0889 155 Gene3D - 23 143 IPR036873 -
Lele56g0889 155 Pfam Rhodanese-like domain 35 137 IPR001763 -
Lele56g0889 155 PANTHER THIOSULFATE SULFURTRANSFERASE 18 24 144 IPR044684 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0889 Lele-ChrLele56 7479772 7481399 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0889 23 142 Sulfurtransferasese or Rhodanese AT5G66170 52.500 1.03e-42 137
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0086 50 546705 553350 Lele56g0889 56 7479772 7481399 CCT
Lele51g0082 51 478768 482873 Lele56g0889 56 7479772 7481399 CCT
Lele52g0083 52 517647 521899 Lele56g0889 56 7479772 7481399 CCT
Lele52g0133 52 779689 783927 Lele56g0889 56 7479772 7481399 CCT
Lele49g0116 49 711279 714318 Lele56g0889 56 7479772 7481399 CCT
Lele50g0129 50 789697 796349 Lele56g0889 56 7479772 7481399 CCT
Lele51g0124 51 727172 740521 Lele56g0889 56 7479772 7481399 CCT
Lele56g0889 56 7479772 7481399 Lele56g0889 56 7479772 7481399 ECH
Lele54g0545 54 11893061 11894809 Lele56g0889 56 7479772 7481399 hybridization