Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0873 ATGAGGAAACCTTTCTCTGATAATAAGGTTATTTTGAACAGAGGAGCTTGGTCCAAACAAGAAGATCAGAAACTCATTGATTATATCAAGAAACATGGCGATGGTTGCTGGCGTACCCTTCCTCAAGCTGCTGGCTTATTTCGCTGCGGCAAAAGTTGTAGGCTTAGATGGATAAACTATCTGAGGCCAAACCTTAAAAGAGGAAACTTTGCTGAAGATGAAGAAGATCTTATCATCAAGCTTCATGCCCTCCTAGGCAACCGGTGGTCACTGATAGCCGGAAGATTACCGGGGAGGACGGATAATGAGGTGAAGAACTATTGGAATTCTCATTTGAGAAAAAAGCTCATAGACAAGGGAATTGATCCGAATAATTATCGGTTAACTCTAAATCCACCATTAATGTTTGGAAGCTCAGCATCATCATATAACAGCCTGAAAGACGACGGCTACGGCGATAACTATAATAATAGCACCAAGATTGGTGATGATGAGCCCGTTAAAAAGCCTTATGCTGATAATAACAAGTCTATTTGTGATAAAGTACTCTCAGATGCAGCAAGTGGTTTAGATGAAGAAGAATCATTTTGCATACCAGATTTGAACCTCGACCTCACTATGATGATCAGTGATGAAATTATTTCTTCTTCTTCTTCACCTCCTCCAGATCCAAAGCCAATTCATGACTATTCTAGAACATCAACTGAACTTCTCTTGTTTAGGTGA 726 0.4008 MRKPFSDNKVILNRGAWSKQEDQKLIDYIKKHGDGCWRTLPQAAGLFRCGKSCRLRWINYLRPNLKRGNFAEDEEDLIIKLHALLGNRWSLIAGRLPGRTDNEVKNYWNSHLRKKLIDKGIDPNNYRLTLNPPLMFGSSASSYNSLKDDGYGDNYNNSTKIGDDEPVKKPYADNNKSICDKVLSDAASGLDEEESFCIPDLNLDLTMMISDEIISSSSSPPPDPKPIHDYSRTSTELLLFR 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0873 241 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Lele56g0873 241 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
Lele56g0873 241 Gene3D - 69 128 - -
Lele56g0873 241 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lele56g0873 241 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lele56g0873 241 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Lele56g0873 241 MobiDBLite consensus disorder prediction 213 233 - -
Lele56g0873 241 Gene3D - 14 66 - -
Lele56g0873 241 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 153 - -
Lele56g0873 241 SMART sant 66 114 IPR001005 -
Lele56g0873 241 SMART sant 13 63 IPR001005 -
Lele56g0873 241 CDD SANT 16 61 IPR001005 -
Lele56g0873 241 FunFam MYB-related transcription factor 13 66 - -
Lele56g0873 241 FunFam MYB transcription factor 68 129 - -
Lele56g0873 241 CDD SANT 69 112 IPR001005 -
Lele56g0873 241 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lele56g0873 241 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0873 Lele-ChrLele56 7154720 7156087 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0873 9 213 MYB Transcription Factor Family AT4G38620 49.515 2.47e-69 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele56g0873 Myb_DNA-binding 1.9e-14 CL0123