Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0866 ATGTTCGGCGGCAATGGTCTGGGCCACGTCGTCGCTGCGGCGGCCGTAACTCTCATCGTCCGCCTATTCACTTGTCCCGCCCCCGCAGCACTCTCGCCGGAAAATGAGAATGACGACCCCTACGATGAGGAGGAAAAGGATGCTGACGGCAGTAAAGCTCCGGTCTCCGGAAAAGTTTCTCCAGTCACAATACGTTGGAGCAATATCACGTGCTCCCTTTCCCGTAAATCCTCCAAGCCGGTGAAATTTTTGCTTAAAAACGTGAGTGGGGAAGCGCAACCTGGAAGGCTATTAGCTATAATGGGGCCGTCAGGTTCAGGAAAAACTGTGTTGCTTGATGTTCTTGCAGGCCAGCTGTCGGCATCGCCTCAGCTGCATTTGTCAGGCCTTTTGGAGTTCAACGGAAACCCAAGTTCAAACAAAACTTACAAGTTTGCTTATGTAAGACAGGAAGATCTATATTTCTCTCAGCTCACTGTGCGGGTAACATTGTCTCTTGCTTCAGAACTACAGCTTCGTGGCATTTCTGTTGAAGAGAGAGATGAATATGTGGATAATCTTCTGTTCAAACTAGGACTGGTCAGTTGTGCTGATACTGAAGTTCGTGGAATTAGTGGTGGTGAAAAGAAGCGCCTAAATCTAGCGTGTGAGCTGATTGCATGCCCATCTGTTATATTTGCTGATGAACCCACCACCGGACTTGATGCCTTCCAAGCTGATAAAGTCATGGAGACCCTTCAACACCTGGCGCATGATGGTCATACGGTAATTTGCTCTATATGTCAGCCAAGAGGTTCAGTGTATAGCAAATTGGACGACATTGTCTTGCTAGCAGATGGTTCACTTATTTATGCTGGTCCTGCTAATAAAGAAATATTGACTTACTTCTCAAAATTTGGGTACCACTGCCCAGATCATGTGAATCCTGCTGAATTTTTGGCCGATCTTGTATCCATTGACTACAGTTCTGCTGAAAGTGTCCATTCCTCTCAAAAAAGAGTTGATGGTCTTGTAGATTCATTCTCACAAAGGCTACCTACAATAGTTTATGCAACTCCAATTACAAGAGATGAACTCTCGAAAGGTGGAAAGAAAATCAGCAAAAGAACTGTAGCTAAGAAGAAAAGATGTTGGTGGAACCAATTCTGGTTGCTCCTCAAGCGAGCATGGATACAGGTTTTCCGTGATGGACCAACAAATCAAGTTTGGGCAAAAATATCGTTTACATCAGCAATTACTCTTGGGTCTGTTTTTTGGAAAATGGGAAGATCTCAGACTTCAATACAAGACAGAATGGGATTGCTTCAGGCTGCTGCAATAAGCACAGCTATAGCAGCTCTCACAAAGACGGTACGGGTGTTTCCAAAGGAACATTCAATTGTAGATAGAGAACGTACCAAGGGCTTATATGAATTGGGTCCTTATCTTTTTTCAAAATTGTTGGCTGAGATTCCCATTGGAGCAGTATTTCCATTAACATTTAGTGCTATTTTGTACCCCATGGCTCGTCTTCATCCTACTTTTCTGAGATTTGGCAAATTCTGTGGTATTATCACTATGGAATATTTCTCTGCATCTGCAATGGGACTTACTGTGGGAGCTATGGTTCCAACCACGGATGCAGCAATGGTAGTGGGCCCCTCTCTTATGACAGTTTTTGTTGTATTTGGAGGATACTATGTCAACCCTGAGAATACTCCAATCATCTTCCATTGGATTCCACGTGTTTCTCTTATTAGATGGGCCTTTCAGGGACTTTGCATCAATGAGTTCAGTGATCTTCAATTTGATCATCAGCAACCATTTGATATTCAAACTGGAGAACAGGCACTAGAGCGCATATCCTTTGGAGGAGTTAGGATCAAGGAAACAGTGATAGCACAAAGCAGAATACTGGTATTTTGGTATTGCACTACCTACTTTCTCTTACAGATAAACAAGCCCAAGTACCAGAAACTTGAGCCACCCCTTTATCCCTACATGTCCCATCTAAAACTTGAAGAGTTAGACCCTGATGAATATGTTGATCAGCCTCTTGATTCTTCATCGTCAGTTGGTCAAGTTGAATCCAGCCAGGGTCTTCAATCTCCTCAACTTGATCATCTTATTGGACCCTTTGTCCTAGAAGGTCTGTATATAGCAGCTCATCCGCTAGATATACATGAAGTTAAGATGGTGGATGAGAATATGATTGTTCTGAGGAAGAGGATTCATGAGATGAAGAAGAAGTACGAGGCGCCTTGTGCTTGGAAGAACTATGACTCTATGGAGTGTGAAGCAATGGGAATTTTGCAGACTTTGTTGATGAACATAAGGCCAAGTTTGGCCTTTGGAATTATGGGTTTAATTGCTCCCAATGTTCCTGTTTCTACTGCTTTTCTTTTGTTTCATTTCTTTGAATTAGATTTTGAACTTTGA 2418 0.4309 MFGGNGLGHVVAAAAVTLIVRLFTCPAPAALSPENENDDPYDEEEKDADGSKAPVSGKVSPVTIRWSNITCSLSRKSSKPVKFLLKNVSGEAQPGRLLAIMGPSGSGKTVLLDVLAGQLSASPQLHLSGLLEFNGNPSSNKTYKFAYVRQEDLYFSQLTVRVTLSLASELQLRGISVEERDEYVDNLLFKLGLVSCADTEVRGISGGEKKRLNLACELIACPSVIFADEPTTGLDAFQADKVMETLQHLAHDGHTVICSICQPRGSVYSKLDDIVLLADGSLIYAGPANKEILTYFSKFGYHCPDHVNPAEFLADLVSIDYSSAESVHSSQKRVDGLVDSFSQRLPTIVYATPITRDELSKGGKKISKRTVAKKKRCWWNQFWLLLKRAWIQVFRDGPTNQVWAKISFTSAITLGSVFWKMGRSQTSIQDRMGLLQAAAISTAIAALTKTVRVFPKEHSIVDRERTKGLYELGPYLFSKLLAEIPIGAVFPLTFSAILYPMARLHPTFLRFGKFCGIITMEYFSASAMGLTVGAMVPTTDAAMVVGPSLMTVFVVFGGYYVNPENTPIIFHWIPRVSLIRWAFQGLCINEFSDLQFDHQQPFDIQTGEQALERISFGGVRIKETVIAQSRILVFWYCTTYFLLQINKPKYQKLEPPLYPYMSHLKLEELDPDEYVDQPLDSSSSVGQVESSQGLQSPQLDHLIGPFVLEGLYIAAHPLDIHEVKMVDENMIVLRKRIHEMKKKYEAPCAWKNYDSMECEAMGILQTLLMNIRPSLAFGIMGLIAPNVPVSTAFLLFHFFELDFEL 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0866 805 Pfam ABC-2 type transporter 262 318 IPR043926 GO:0140359
Lele56g0866 805 Pfam ABC transporter 85 231 IPR003439 GO:0005524
Lele56g0866 805 Pfam ABC-2 type transporter 381 591 IPR013525 GO:0016020|GO:0140359
Lele56g0866 805 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 64 290 IPR027417 -
Lele56g0866 805 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 64 304 IPR003439 GO:0005524
Lele56g0866 805 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 46 609 - -
Lele56g0866 805 Gene3D - 58 296 IPR027417 -
Lele56g0866 805 SMART AAA_5 94 281 IPR003593 -
Lele56g0866 805 CDD ABCG_EPDR 61 286 - -
Lele56g0866 805 ProSitePatterns ABC transporters family signature. 204 218 IPR017871 GO:0005524|GO:0016887
Lele56g0866 805 MobiDBLite consensus disorder prediction 31 56 - -
Lele56g0866 805 FunFam ABC transporter G family member 7 62 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0866 Lele-ChrLele56 6985072 6995997 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0866 78 282 Calmodulin-binding Proteins AT2G36910 27.103 7.30e-09 57.8