Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0835 ATGGAAGATAGAAGTTTCTTATCGATCACGAGTTCATCAGTTCCTAGTTTTGCTCAAGGGCTTAAGATTTTGCTGGTTCATAATGACACCATGTCGATCATCAACTTGACATCTATGCTTCAGAAATACTCATTCAGAGTCACTGTTACTGATGAAGCAAAAGCAGCTGTGTCCATGATTTGTCATGCTGAAGATAGCCAATTCAACCTGGTAATGGCTAAAGATAACTTGCCTGACATGGATACTCTTTCATTTCTCCACTTGATGCTTGAAAACTACATCCCTGTCATCTTCATCTCTTCTGGAGAATACAATGATGTAAAATGGAAAGCATTGTCTAAAGGCTCATGTTTTTTCCTGGAAGAACCAATCCTTTTAGAGGATCTCAAATATGTGTGGCAGCATGTTTATCAAACAAAAGTCAACTTGGCCAAGAAAAATGATCAGCAAACTTGTGTAAGCAAGGTTCATGGAACTCTTAATGATAGAAAATATGTGGGAAAAGAAAAGAGAAAAAGGTTAGGGATGAACTTTGAGGGCAATCACCTTGCTGCTTTTATGGAGGAGGATGAGGATACAGCAGAAAGAGGACAACAAAACTATGATGAATTTTCCGAGAAAAGGCCGCGTATTGTTTGGACTCCAAAGCTGCATCAGAAGTTCTTGGATGCCATTAATGTTCTGAGTGAGAGAAGTTTAGGGTTTAAGAAATACAGAACTCAAGAATTGATAAACCAGCAGGCTTGCATTTCTGGATTCACTTCCTCACCATTTCAGAGCCAAGGTTATCCAGGTTTTCCCATATCAATTGCAGCCCTTAATGGGAGCCAAAATCAAAACCATCGTTCATTGATTTTCATTGAAACTCAAGAATCAGATATGCCACAAATGGATGAATTTCCAAGAGCATTGAGCAATTATGGAACCCAAAACCTAGAAGCTGAAGTGGGACATCCAAAACCAGATGCTTCAATGGATCAAAACCAACCCATGAGAGCACATGATGATCCTATGAAAATGCTTGAGGAAGATTTTGAAGAACATGATTATTCTCAGAATGGAGTTCTTCAAGATCAAATTGATGAATACTGTGAAATGCTAAGGAACACTCTTTTAAGAAATAATAGCCCTCCTCATGATCCTCAAGATCCTGATATATGA 1161 0.385 MEDRSFLSITSSSVPSFAQGLKILLVHNDTMSIINLTSMLQKYSFRVTVTDEAKAAVSMICHAEDSQFNLVMAKDNLPDMDTLSFLHLMLENYIPVIFISSGEYNDVKWKALSKGSCFFLEEPILLEDLKYVWQHVYQTKVNLAKKNDQQTCVSKVHGTLNDRKYVGKEKRKRLGMNFEGNHLAAFMEEDEDTAERGQQNYDEFSEKRPRIVWTPKLHQKFLDAINVLSERSLGFKKYRTQELINQQACISGFTSSPFQSQGYPGFPISIAALNGSQNQNHRSLIFIETQESDMPQMDEFPRALSNYGTQNLEAEVGHPKPDASMDQNQPMRAHDDPMKMLEEDFEEHDYSQNGVLQDQIDEYCEMLRNTLLRNNSPPHDPQDPDI 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0835 386 Coils Coil 187 207 - -
Lele56g0835 386 SMART REC_2 21 133 IPR001789 GO:0000160
Lele56g0835 386 Gene3D - 205 255 - -
Lele56g0835 386 Gene3D - 21 157 - -
Lele56g0835 386 PANTHER TWO-COMPONENT RESPONSE REGULATOR 22 246 IPR045279 GO:0009736
Lele56g0835 386 ProSiteProfiles Response regulatory domain profile. 22 137 IPR001789 GO:0000160
Lele56g0835 386 SUPERFAMILY CheY-like 19 142 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0835 Lele-ChrLele56 6526491 6531857 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0835 17 228 Response Regulator Gene Family AT4G16110 30.374 1.91e-25 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele56g0835 None None None