Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0832 ATGGAGGTTCCCTCCGCCACTCCGGCCCCCTCCTCCGCCCCAGCCTCTCATCTCAACTATCCCGACTCCGTTGACTCCTCCCCTCGCTCCCGGAACACTGATTCCTGGGACGAGTCTATCCTTCCGGCCGCCGCCGCCGCCGCGGCTTCCGCCAAGCTTCGCTTCATGTGCAGCTACGGCGGTCACATCGTCCCTCGTCCCCACGATAAGTCCCTCTGTTACGTTGGTGGGGAAACCCGTATCGTTGTCGTTGAACGCCACACCTCCCTCACTGACCTCTCCTCTCGTCTCTCTAATACCTTCCTCAACGGCCGTCCCTTCACTCTCAAATACTTGCTTCCCACTGAAGACCTCGATTCTCTAATTTCTGTAACCACCAATGAAGACCTTGATAACATGATCGACGAGTACGATCGAATTTCTAATTCGGCACTGAAACCCTCTAGAATCCGCCTCTTCTTGTTCCCTGTGAAACCCGATTCCGCCCAATCGATACCCGTAATTAGTAGCTCGGCGAAGTCTGAGGATTGGTTTCTGGGTATGCTTAATAGAGGGTTTTCGGATTCTGGTTCCGTTAATTTGTTGATGGGTTTTGATGATGAGGTTGGTGCTGGCAATCTGGATGGGGCTTCGAAAGATGTCGTGGCTGTGGGGTCTGGATCTTTTGGGAATGGCAAGAGTGCGAGGCAGCAGGGGCAAGATGTTCACTCGGTGCCCGATTCACCTATGCTGGAAATCACATCTTCATTTGGGTCCACTTCTTCATCGCCGTCAGTGGCGAATTTGCCGCCAATTCGGGTTCATGCTGATGATGTTAGTGGTGGTGGAGCGAGGGCTCAGGATCAGAAGGCGGTGGGCATTGAGGAACAGCTTGCTCAAATGGGTATTGGTGGCGGACAGAAGCAGGATGAGGGTTTTCTGATGTCTTCACCTCCTACTATGCCAGCATCCACCGTCCCGGCTGCCGGTGTGCCCATTGGCTCCTCGGTCCTTCCAGGTGAATACCAGAATCGTGTTGTATCTGATGATGAGAGATCAGAGAGATCAGACCATGGAGTCCTTGGGGGTTATAGGAAACCTCCGACAGCGCAGCCACAGACGGTGCCTCAGCCGCAGATTCTGCAATCGCAATTGCCGCAGAAGCAGGATTTGCCTTCTCCTGATTCAGTTTCAAGTAGTATGACAAATGCAATGTCACGTTCAAAACCTATGGTCTATCAAGACCAAGCTCAGCTCCAAATTCCCTCAGGAGCTACAAGGGTTCCTAGTAATCAGGTTGATCCGAAACTTACAATGTCTGATTCTCATGGACGGATGCAAGTGCAACAAGTATTGGAACAGGGATATGTTTTGCAACAACAATTCGAACAGCAACAACAGCAGCACCAATTTATACATGGAACACAGCAACAAGTACAGGAAGCAGGATATGTGTTGCAACAACAATTCGAACAGCAGCAGCAGCAACAACCTTCTCAACAGCAGCACCAATTTATACACGGAACACAGCAACAAGTACAGGAAGCAGGATATGTGATGCAACAACAATTCGAACAGCAACTGCAGCAGCAGCAGCAGCAGCAGCAACAACCTCCTCAACAGCAGCACCAATTTATGCATGGAGCACAGCAACAAGTACAGGAAGCGGGATATGTATTGCAACCTCAAATCGATCAACAACAGCAACAATTTATACATGGCACACATTTCATTCACCATGCCCCTTCCCAGGCCGTGCCACTCCCTGCATTCTATCCTGTATATCATTCCCAGCAGCAGCTTCATCCTCAGCTTGAACAGCAGTATCAGGTTTACTATGTTCCCACTAGGCAGACCCAACATTACAATTTGTCTGCACAGCAATCTAACATTAGCGAACCTGCTACAACAATTCCTTCTAGCCGTGCCCAAACAACAACAAATCCTGCAGCTTACAACCCCATCAGAAATGCTCCGGTAGCTAAATCCGAAATGCAAGCAGATGCATATGGAACAGCAATTTCAGTCACCCCTCAAGTGGTTCAGGTTGCTTCTGGTCAGCCTCAGCAGCAATTTGTTGCCTATTCCCAGTATCAGCATCCATCTCAGGCTGTTGCCGCCAATTCTGCTGCCCCGGCTAGTTATGCTTATGAGTATGCCAATCCTGCTCATGCCCAGATATACTTCTCTCAGCCTCTGGCACCCACCATGACTTCACAGTACCAAACCATGGCAGGTGCTGCTGCTGCTGCAGAGCCTCCCTCAGACAGCATGAAGAAGCAAATAAGAACATCAGAGCCACATTTGAATTGGACCATTTCTGATGGAATGTAG 2313 0.5015 MEVPSATPAPSSAPASHLNYPDSVDSSPRSRNTDSWDESILPAAAAAAASAKLRFMCSYGGHIVPRPHDKSLCYVGGETRIVVVERHTSLTDLSSRLSNTFLNGRPFTLKYLLPTEDLDSLISVTTNEDLDNMIDEYDRISNSALKPSRIRLFLFPVKPDSAQSIPVISSSAKSEDWFLGMLNRGFSDSGSVNLLMGFDDEVGAGNLDGASKDVVAVGSGSFGNGKSARQQGQDVHSVPDSPMLEITSSFGSTSSSPSVANLPPIRVHADDVSGGGARAQDQKAVGIEEQLAQMGIGGGQKQDEGFLMSSPPTMPASTVPAAGVPIGSSVLPGEYQNRVVSDDERSERSDHGVLGGYRKPPTAQPQTVPQPQILQSQLPQKQDLPSPDSVSSSMTNAMSRSKPMVYQDQAQLQIPSGATRVPSNQVDPKLTMSDSHGRMQVQQVLEQGYVLQQQFEQQQQQHQFIHGTQQQVQEAGYVLQQQFEQQQQQQPSQQQHQFIHGTQQQVQEAGYVMQQQFEQQLQQQQQQQQQPPQQQHQFMHGAQQQVQEAGYVLQPQIDQQQQQFIHGTHFIHHAPSQAVPLPAFYPVYHSQQQLHPQLEQQYQVYYVPTRQTQHYNLSAQQSNISEPATTIPSSRAQTTTNPAAYNPIRNAPVAKSEMQADAYGTAISVTPQVVQVASGQPQQQFVAYSQYQHPSQAVAANSAAPASYAYEYANPAHAQIYFSQPLAPTMTSQYQTMAGAAAAAEPPSDSMKKQIRTSEPHLNWTISDGM 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0832 770 MobiDBLite consensus disorder prediction 1 35 - -
Lele56g0832 770 ProSiteProfiles PB1 domain profile. 52 157 IPR000270 GO:0005515
Lele56g0832 770 MobiDBLite consensus disorder prediction 338 354 - -
Lele56g0832 770 MobiDBLite consensus disorder prediction 9 35 - -
Lele56g0832 770 SUPERFAMILY CAD & PB1 domains 68 164 - -
Lele56g0832 770 Gene3D - 72 156 - -
Lele56g0832 770 MobiDBLite consensus disorder prediction 328 404 - -
Lele56g0832 770 PANTHER OS05G0427100 PROTEIN-RELATED 19 519 - -
Lele56g0832 770 MobiDBLite consensus disorder prediction 368 404 - -
Lele56g0832 770 MobiDBLite consensus disorder prediction 625 646 - -
Lele56g0832 770 Pfam PB1 domain 68 156 IPR000270 GO:0005515
Lele56g0832 770 CDD PB1_UP2 56 155 - -
Lele56g0832 770 SMART PB1_new 67 157 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0832 Lele-ChrLele56 6496734 6499776 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0832 12 219 MAP Kinase Kinase Kinase AT1G79570 33.028 1.84e-26 114