Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0829 ATGCTTCCTTTGCTCTCGTTGTTTCCTCTTCTTCTTCTCTGTAATCATCTTTCGACTGTGACTTCTCTGAATGCCGAAGGCTCTGTACTTTTGGCTCTTAAGCAGTCCATCACAGACCCAGAAGGTTCTCTGAGTAACTGGAATTCTTCTGATGCAAACCCCTGTTCGTGGAATGGGGTTACATGCAAGGAACATAGTGTTATTTCTATCAGTATTCCAAAGAGGAAGCTTTACGGCTCGCTTCCTTCTTCTCTGGGATCTCTTTCTCAGCTTCGCCATGTGAATTTCAGGAACAATAAGCTCTTTGGGAAGTTGCCTCCGGAGCTATTGGTAGCACAGGGACTGCAAAGTTTAGTCCTTTATGGCAATTCCTTTTATGGGCCTGTTCCACAAGAGATTGGGAAGCTCAGGTACCTTCAAACCTTAGATTTATCACAAAATTTCTTCAATGGGTCTTTACCTGCTACAATTGTACAATGCAAGAGACTCAGAACCCTTGTTCTTAATCACAACAATTTCACCGGTCCTCTTCCGGATCGATTTGGCACTGATTTGTTCTCTCTGGAAAAACTTGACCTTGCTTTCAATCACTTCAATGGCTCAATTCCTAGTGATATGGGGAATCTATCTAGCCTACAAGGAACTGTAGATTTATCTCATAATAGTTTTTCTGGCTTAATCCCATCCAGCCTTGGTAATTTGCCTGAGAAAGTTTATATTGATCTTACTTTCAACAATTTGAGTGGTCCAATCCCACAAAATGGTGCTTTGATGAACAGAGGACCAACAGCTTTTATAGGCAATTCTGGTCTCTGTGGACCTCCTTTGAAGAACCCTTGTGCTTCAGAAACTCCTGGTGCTAGCTCGCCTTCTTCGTTACCATTTCTTCCAGATAACTACCCACCTGGGGATTCTGATAATCCTTATGGGAGGAATGAGAAAACCAAAGGGTTAAGTAAGGGTGCTATTGTAGGCATTGTTGTGGGTGATATAGTTGGAGTTTGCCTCTTGGGTTTGTTGTTCTCTTACTTCTACTCAAGAGTTTGTGGGTTTAATCTGGATAACGATGACGAAGCTAGTTTTGAGAAGGGAGAGAAAGGAAGGAGGAAAGAGTGTTTTTGCTTCAAAAAGGATGAATCCGAGACCTTATCTGAGAATGTCGAGCAATATGATCTTGTCGCGTTAGATTCTCAAGTGGCATTCGATTTGGATGAGCTTCTCAAGGCTTCAGCTTTTGTTTTGGGAAAGAGTGGAATAGGCATTGTCTACAAGGTGGTGCTTGAAGACGGGCTTACCTTAGCCGTGAGAAGATTAGGGGAAGGCGGTTCTCAAAGGTTTAAAGAATTCCAAACAGAAGTGGAAGCAATAGGAAGATTAAGGCACCCTAACATTGTTACCCTTAGAGCTTATTACTGGTCTGTTGATGAGAAACTTCTCATCTATGATTACATACCCAATGGAAATCTTGCTACGGCAATTCATGGGAAGGCTGGAATAGTTGCATTCATGCCACTTTCTTGGTCGGTTAGGCTGAAAATCATGAAAGAAATTGCGAAAGGATTGGTCTACCTGCATGAGTTTAGCCCCAAGAAATATGTCCATGGAGACCTGAAACCGAGTAACATACTGCTTGGGAATAACATGGAGCCCCACATTTCTGATTTTGGACTTGGAAGACTTGCGAATATTGCCGGAGGCTCTCCAACCTTGCAATCCAATCGAGTCGCTGCTGAGAAACCCCATGAAAGGCAAAAGAGCTTTTCTGCATCAGAAGTCTCAGCTAATGTTTTGGGAACTGGCTATCAGGCTCCAGAAGCATTGAAAGTGGTGAAGCCATCACAGAAATGGGACGTTTATTCATATGGCGTGATTTTGATAGAGATGATCACGGGAAGGTTGCCCATTGTCCACGTGGGAAACTCAGAAATGGACCTTGTCCAATGGATTCAGTTCTGTATTGAGGATAAGAAGCCGCTCTCAGATGTAATAGACCCGTATCTCCCAGAAGACACAGATAAGGAAGAGGAGATCATCGCAGTCTTGAAGATCGCAATGGCTTGTGTCCATAGCAGCCCCGAGAAGAGACCGACAATGAGGCATGTTCTCGATGCTTTGGATAGGTTGTCCGCTTCTTCTGATTGA 2142 0.4346 MLPLLSLFPLLLLCNHLSTVTSLNAEGSVLLALKQSITDPEGSLSNWNSSDANPCSWNGVTCKEHSVISISIPKRKLYGSLPSSLGSLSQLRHVNFRNNKLFGKLPPELLVAQGLQSLVLYGNSFYGPVPQEIGKLRYLQTLDLSQNFFNGSLPATIVQCKRLRTLVLNHNNFTGPLPDRFGTDLFSLEKLDLAFNHFNGSIPSDMGNLSSLQGTVDLSHNSFSGLIPSSLGNLPEKVYIDLTFNNLSGPIPQNGALMNRGPTAFIGNSGLCGPPLKNPCASETPGASSPSSLPFLPDNYPPGDSDNPYGRNEKTKGLSKGAIVGIVVGDIVGVCLLGLLFSYFYSRVCGFNLDNDDEASFEKGEKGRRKECFCFKKDESETLSENVEQYDLVALDSQVAFDLDELLKASAFVLGKSGIGIVYKVVLEDGLTLAVRRLGEGGSQRFKEFQTEVEAIGRLRHPNIVTLRAYYWSVDEKLLIYDYIPNGNLATAIHGKAGIVAFMPLSWSVRLKIMKEIAKGLVYLHEFSPKKYVHGDLKPSNILLGNNMEPHISDFGLGRLANIAGGSPTLQSNRVAAEKPHERQKSFSASEVSANVLGTGYQAPEALKVVKPSQKWDVYSYGVILIEMITGRLPIVHVGNSEMDLVQWIQFCIEDKKPLSDVIDPYLPEDTDKEEEIIAVLKIAMACVHSSPEKRPTMRHVLDALDRLSASSD 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0829 713 SMART serkin_6 413 709 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele56g0829 713 Gene3D Phosphorylase Kinase; domain 1 375 483 - -
Lele56g0829 713 ProSitePatterns Serine/Threonine protein kinases active-site signature. 532 544 IPR008271 GO:0004672|GO:0006468
Lele56g0829 713 Gene3D Ribonuclease Inhibitor 19 77 IPR032675 -
Lele56g0829 713 Gene3D Ribonuclease Inhibitor 78 283 IPR032675 -
Lele56g0829 713 ProSiteProfiles Protein kinase domain profile. 408 708 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele56g0829 713 FunFam Leucine-rich repeat receptor-like protein kinase 391 483 - -
Lele56g0829 713 Pfam Protein kinase domain 414 703 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele56g0829 713 Pfam Leucine rich repeat N-terminal domain 24 62 IPR013210 -
Lele56g0829 713 FunFam Leucine-rich repeat protein kinase family protein 484 711 - -
Lele56g0829 713 SUPERFAMILY Protein kinase-like (PK-like) 413 705 IPR011009 -
Lele56g0829 713 CDD STKc_IRAK 414 708 - -
Lele56g0829 713 FunFam Leucine-rich repeat receptor-like protein kinase 187 282 - -
Lele56g0829 713 SUPERFAMILY L domain-like 25 277 - -
Lele56g0829 713 PANTHER OS05G0588300 PROTEIN 133 708 - -
Lele56g0829 713 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 23 183 - -
Lele56g0829 713 MobiDBLite consensus disorder prediction 280 313 - -
Lele56g0829 713 Gene3D Transferase(Phosphotransferase) domain 1 484 713 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0829 Lele-ChrLele56 6475278 6477563 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0829 1 713 Receptor kinase-like Gene Family AT2G01210 67.590 0.0 981
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele56g0829 Pkinase 1.1e-35 CL0016