Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0826 ATGATCCAAAACCACCTCTTCCCATCCTTCTTCTTCGTCTTTGTTTATTCGCTCACCATATTCACCTTCTGTTCATCTGTGAACCCAAAGTTCGAAGCTTGTAACCCCGCAACCTGCGGTAACCAAACCATAAAATACCCTTTTTACATCAAAGGCCGACATAAATCCTTCTGTGGATACCCAGGTTTCGGCCTTTCTTGTTCCGATAATGGCGTCTCAATCCTTAATATCTCCCTTACCCAGTACATCGTCCATGAAATTTCTTACGAAACACAGTCAATTCGAGTGTCCGAAGTTGCTATCTCTTCACCAAACGCCACATCCTCATCGTCCTGTGCGATTCCTCGTATTCACAACACCACCTTATTCGAGGGAACAAGATTCAGTTTCCCTCCGAACCAGAAGGACCTGTTCTTGTTGTTTGGATGCAATCTGGAGTTGCTGCCGGGGTATTTTTTGAGGTACAAAATTGGATGTTCTGCAGAAAACGAAACGATGTCAGTTTTGGCCATGACGGAGGGGGGCGGCGGAGATTTTAGGTTGGCATCGGAGGAATGTAATGGTGGGGTGGTGAAGACGAAGATTGGAAATGAAGGGAACGGAGGGATTATTAATGGAGATGTAGTGAGAAGAGGGTTTGAGTTGAATTGGATTGTGGCAAGTTGCAGCTTGTGTGAGAGAACCAAAGGGAAGTGTGGGTTCAACTCCAACAAAAGTGTTTACAGTTTCAAATGCTATTGCCCAGATAGAGATCATGCTCTCAAATGCGATCCGGAGGATAAGAGCCGGGTTCTGAAGCTGGGACTAGGAATAGGATTAGGTATTGGGCTTCCAGCCATTCTGATGATTGCGTGGCTCATCGGACGACGGTGTTACCGACGAAAACATGGTTCTGATGATGATGATCAATTCGAACCCAAAAGAAACTCTTATTCTTCTGATTACTCAAATTCAGACCCGGAAAATTGCAATATCTACTTAGGACTTTCATTGTTCTCTTACAAACAGCTTCATGGGGCAACACACAACTTTGACCCAGCAAGAGTACTTGGAGATGGTGGCTTTGGAATTGTTTACTATGGAAAACTCAGAGATGGACGAGAAGTTGCAGTCAAACGTCTATACGAACACAATTATAGAAGAGTAGAACAGTTCAGAAATGAAGTGAAGATACTCACACGTCTACGCCACAAAAATCTTGTGTCTTTATATGGCTGCACTTCACGCCGGAGCCAAGATCTCCTCCTCGTCTATGAATACATCTCAAACGGCACCGTCGCTAGCCACCTCCAAGGCAACAACAACTCATCATCGGAATCTACGACATCACTACCATGGTCGATTCGCATCAAAATCGCAATAGAAACAGCAAGCGCGTTGGTCTACCTTCATGCTTCCGACATCATCCATCGTGATGTAAAAACCAACAACATCCTCGTCGACAACAATTTCAATGTTAAAGTTGCAGACTTTGGACTTTCCAGATTGTTCCCTAATGATGTTTCGCATGTTTCCACAGCCCCACAAGGAACACCAGGTTATGTGGACCCAGAATATTACCAGTGTTATCAGCTTACTAGTAAGAGTGATGTGTATAGTTTTGGGGTTGTTCTTATTGAGTTGATATCTTCTAAACCTGCGGTGGATATAAGTAGAAATAAGGATGAAGTGAACTTGTCGAGTTTGGCGATGAAGAAGATTCAGGAGAGTGCGTTTATGGAGCTTGTGGATCCATGTTTGGGGGTTGAGAAGGATGGTGAAGTGAAGAGGATGGTGGTTTCAGTGGCGGAATTGGCATTTCAGTGTTTGCAGAGGGATAAGGATTTGAGGCCTTCCATGGAAGAGGTTTTGGAAGCTCTCCAGAGGATTCAGAGAGGGACAGGTGATGACGAGGTTGAGAATCTTCAAGGTGGTGAAGTTTTGGATTGTGATAATGTGATGAATCCATTGGCTCCACCGTCGCCGCCATCAATGTCACCGGGGAAGGAAGAAGTTGGATTATTGAAGAAGGCGAAGCCGCCGCCTTCTTCGCCAAATGCTGTGACTGATAAATGGACGAGTGAATCTTCCACCCCTAATGCGAGTGCTTGA 2091 0.4491 MIQNHLFPSFFFVFVYSLTIFTFCSSVNPKFEACNPATCGNQTIKYPFYIKGRHKSFCGYPGFGLSCSDNGVSILNISLTQYIVHEISYETQSIRVSEVAISSPNATSSSSCAIPRIHNTTLFEGTRFSFPPNQKDLFLLFGCNLELLPGYFLRYKIGCSAENETMSVLAMTEGGGGDFRLASEECNGGVVKTKIGNEGNGGIINGDVVRRGFELNWIVASCSLCERTKGKCGFNSNKSVYSFKCYCPDRDHALKCDPEDKSRVLKLGLGIGLGIGLPAILMIAWLIGRRCYRRKHGSDDDDQFEPKRNSYSSDYSNSDPENCNIYLGLSLFSYKQLHGATHNFDPARVLGDGGFGIVYYGKLRDGREVAVKRLYEHNYRRVEQFRNEVKILTRLRHKNLVSLYGCTSRRSQDLLLVYEYISNGTVASHLQGNNNSSSESTTSLPWSIRIKIAIETASALVYLHASDIIHRDVKTNNILVDNNFNVKVADFGLSRLFPNDVSHVSTAPQGTPGYVDPEYYQCYQLTSKSDVYSFGVVLIELISSKPAVDISRNKDEVNLSSLAMKKIQESAFMELVDPCLGVEKDGEVKRMVVSVAELAFQCLQRDKDLRPSMEEVLEALQRIQRGTGDDEVENLQGGEVLDCDNVMNPLAPPSPPSMSPGKEEVGLLKKAKPPPSSPNAVTDKWTSESSTPNASA 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0826 696 MobiDBLite consensus disorder prediction 295 317 - -
Lele56g0826 696 Pfam Protein kinase domain 347 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele56g0826 696 ProSiteProfiles Protein kinase domain profile. 344 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele56g0826 696 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 10 689 IPR044652 GO:0004672
Lele56g0826 696 ProSitePatterns Protein kinases ATP-binding region signature. 350 372 IPR017441 GO:0005524
Lele56g0826 696 Pfam Wall-associated receptor kinase C-terminal 206 249 IPR032872 -
Lele56g0826 696 MobiDBLite consensus disorder prediction 679 696 - -
Lele56g0826 696 CDD STKc_IRAK 350 623 - -
Lele56g0826 696 Pfam Wall-associated receptor kinase galacturonan-binding 34 97 IPR025287 GO:0030247
Lele56g0826 696 Gene3D Transferase(Phosphotransferase) domain 1 421 640 - -
Lele56g0826 696 FunFam Wall-associated receptor kinase-like 20 421 633 - -
Lele56g0826 696 Gene3D Phosphorylase Kinase; domain 1 316 420 - -
Lele56g0826 696 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Lele56g0826 696 MobiDBLite consensus disorder prediction 647 696 - -
Lele56g0826 696 SMART serkin_6 344 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele56g0826 696 SUPERFAMILY Protein kinase-like (PK-like) 319 625 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0826 Lele-ChrLele56 6416412 6425126 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0826 30 696 Receptor kinase-like Gene Family AT1G25390 45.630 4.48e-167 492
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Lele56g0826 Pkinase 1.3e-49 CL0016