Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0820 ATGGCTGCGTCCTCTCGCCTCTTTCTACTTGCTTTCTTCTTCTTCTTAGTTCCTCATTTGCCTCTTCCCGCTGAAGCGGCCATAAACCAAGATTTAGAAGCTCTCATGGCGTTCAGAGCCGCTTCTGATACGCACAACAAGCTCACATCTTGGAACTCCACCACCCACCCCTGTAACTGGGTCTTTGTATCATGCCTCAAGAATCGAGTTTCGCGACTTGTTCTTGAAAATCTCGATCTCCATGGTTCTATCGAGCCGTTAACTTCTCTCACTCAGCTTCGAGTTCTGAGCCTGAAGCGTAACCGTTTCTCCGGTCCTATTCCCAGTCTGTCTAATTTTACAGCTCTCAAGCTTCTGTTTCTTTCTCACAATCAGTTCTCCGGTGCGTTTCCGGTGTCGGTTACGTCGCTTCTCCGCTTGTATCGCCTTGATCTGTCTCACAACAACTTTTCCGGCGACATTCCGACTACCTTCAACAATCTGACTCACCTTCTCTCTCTCCGTCTCAATGACAACCAGTTCTCCGGTCACATTCCCATTCTAAACCTCTCCAAACTCCAAGACTTCAATGTCTCCGGTAACCGCCTCTCCGGCGAAATCCCCAAATCACTCTCGGGTTTCCCCGAATCATCATTCTCTCAAAACCCATCCTTATGTGGAGCTCCATTGGTGAAATGTAACAACACTCATGCCGTACCATTTAAACCTGGATCTGTGGGACCCAACATTCCACCGCCATTAACTCGGCGAAGCAATCCTTCCAAGCCGGCGAACAATACAGCCCCGAAAACATCATCTAACAGCACACACAACCATCATAACAACGGAGCTTCTTCGAAGATGAGCCCAGTAATTCTAATCGCCATTATAGTCGGCGACGTTCTGGTTCTGGTTGTAGTATCCCTTCTTCTGTACTACTGTTTCTGGCAAAAGTACTCCGCAAAATTGAAAGAAGGAAACATGTCGAACCTTCTGGAAAGCGAGAAGATCTTGTATTCATCAAGCCCATACCCATCAAACCAACCGGGATTCGAGAGGGGTCAAATGGTGTTCTTCGATGGGATGAAGAAGTTCGAACTAGAAGACTTGCTTCGAGCTTCTGCAGAAATGTTAGGGAAAGGTGGATTTGGAACGGCGTATAAAGCTGTTCTTGACGACGGCAATGTCGTCGCCGTGAAGAGGCTTAAGGAAGCTCAGATTAATGGGAAGAAAGAGTTCGAACAACACATGGAAATTCTGGGAAGATTAAGGCATCCCAATATTGTTTGCTTGAGAGCTTACTATTTTGCTGGAGATGAGAGATTGCTGGTTTATGATTACATGACCAATGGTAGCTTGTTTTGGCTCCTTCATGGGAACCGGGGACCCGGGAGAAGCCCATTGGATTGGACCACGAGGCTCAAGATAGCCGCCGGAGTGGGCCGAGGTCTGGCCTTCATACACAGCTCCTGCAAGGCCGTTAAGCTCACCCACGGTAATATTAAATCCACCAACATCCTCATTGACCAGGACGGTGACCCACACGTGGCAGACTTCGGGCTCTCTGTTTTCGCATCCCCCGCCACCAAATCTAACGGCTATCGTGCCCCGGAAGCATTGGATGGTCGGAAAAACACGCAGAAATCAGACGTGTACTCCTTTGGTGTTCTTCTGCTGGAGCTTCTCACCGGGAAGTGCCCCTCTGTAGGGGATGCTGGTGGGCCCGGAGGAGGTGGGGCCGTGGACCTACCGAGGTGGGTGCAGTCAGTGGTGAGAGAGGAATGGACAGCTGAGGTGTTCGACATGGAGCTGATGAGTTACAAGGACATTGAAGAGGAGATGGTGGGGCTGCTTCAGATCGCCATGACTTGTTGCGCGGCTGTGCCAGATCAACGGCCCAGGATGAGCCACGTGGTGAAGATGATCGAGGACATACGTGGGGTCGAGATTTCACCGAGTCATGACCCGTCGGACTCGGCGTCTGAGTCGCCATCCTTGTCAGGCTAA 1986 0.5025 MAASSRLFLLAFFFFLVPHLPLPAEAAINQDLEALMAFRAASDTHNKLTSWNSTTHPCNWVFVSCLKNRVSRLVLENLDLHGSIEPLTSLTQLRVLSLKRNRFSGPIPSLSNFTALKLLFLSHNQFSGAFPVSVTSLLRLYRLDLSHNNFSGDIPTTFNNLTHLLSLRLNDNQFSGHIPILNLSKLQDFNVSGNRLSGEIPKSLSGFPESSFSQNPSLCGAPLVKCNNTHAVPFKPGSVGPNIPPPLTRRSNPSKPANNTAPKTSSNSTHNHHNNGASSKMSPVILIAIIVGDVLVLVVVSLLLYYCFWQKYSAKLKEGNMSNLLESEKILYSSSPYPSNQPGFERGQMVFFDGMKKFELEDLLRASAEMLGKGGFGTAYKAVLDDGNVVAVKRLKEAQINGKKEFEQHMEILGRLRHPNIVCLRAYYFAGDERLLVYDYMTNGSLFWLLHGNRGPGRSPLDWTTRLKIAAGVGRGLAFIHSSCKAVKLTHGNIKSTNILIDQDGDPHVADFGLSVFASPATKSNGYRAPEALDGRKNTQKSDVYSFGVLLLELLTGKCPSVGDAGGPGGGGAVDLPRWVQSVVREEWTAEVFDMELMSYKDIEEEMVGLLQIAMTCCAAVPDQRPRMSHVVKMIEDIRGVEISPSHDPSDSASESPSLSG 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0820 661 SUPERFAMILY L domain-like 44 224 - -
Lele56g0820 661 Pfam Leucine rich repeat N-terminal domain 29 65 IPR013210 -
Lele56g0820 661 Gene3D Ribonuclease Inhibitor 22 87 IPR032675 -
Lele56g0820 661 SUPERFAMILY Protein kinase-like (PK-like) 369 635 IPR011009 -
Lele56g0820 661 MobiDBLite consensus disorder prediction 252 276 - -
Lele56g0820 661 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 9 639 - -
Lele56g0820 661 MobiDBLite consensus disorder prediction 642 661 - -
Lele56g0820 661 ProSiteProfiles Protein kinase domain profile. 365 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele56g0820 661 FunFam Nuclear pore complex protein NUP107 28 180 - -
Lele56g0820 661 Gene3D Transferase(Phosphotransferase) domain 1 441 651 - -
Lele56g0820 661 MobiDBLite consensus disorder prediction 647 661 - -
Lele56g0820 661 CDD STKc_IRAK 371 638 - -
Lele56g0820 661 ProSitePatterns Protein kinases ATP-binding region signature. 371 393 IPR017441 GO:0005524
Lele56g0820 661 Gene3D Phosphorylase Kinase; domain 1 343 440 - -
Lele56g0820 661 Pfam Protein kinase domain 369 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele56g0820 661 MobiDBLite consensus disorder prediction 235 276 - -
Lele56g0820 661 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 441 647 - -
Lele56g0820 661 Gene3D Ribonuclease Inhibitor 88 232 IPR032675 -
Lele56g0820 661 FunFam pollen receptor-like kinase 1 338 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0820 Lele-ChrLele56 6357385 6360852 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0820 31 660 Receptor kinase-like Gene Family AT1G68400 65.630 0.0 798
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele56g0820 Pkinase 2.2e-39 CL0016