Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0816 ATGGTGGCAAAACGGAAAAGCAAGAGACAAACGCAATGCCTTGGGTCCCCTGAGCATTCTCGGGTCGTGTTCCCATATTTCACACCCTTCCTCTTCTCCTTGGGATTTTCACTAACCCTTTCGGATTTATATTCAAAGTTTCTAACTTTGATTCAAATCTCAGCTATGGAGGATCCGATTGATCATTACCAAACCAAAAGAACGAACCCCACCAATTCAACCACTAGAGTAAAGCTCTTCGGCTTCAATGTTCAAGAAGATATGGAAGATGAAGCAGTAGTGCTTGAAGATGTATCAGATTCCACAGGCAAGCCTGCCACCCCATCTGGCTCGCCGGATTCCGGATGCGGCGGTGGTGCGGCGTTCCTTCCCTCCTCCGGTGACAGGAAATACGAGTGTCAGTATTGTTGCAGAGAGTTTGCGAATTCACAAGCGCTTGGTGGGCACCAGAACGCTCACAAGAAAGAGCGTCAACAATTAAAACGAGCGCAGTTGCAAGCCACGCGCAACGCCGCCGTTCCGTTTGTTCGGAACCCCATAATCTCCGCCTTCGCCCCTCCGCAGCACCTCCTTGCTCCGAACGGGTCCGTTGTGCTCCCTGCAGCTCCGGCGTCATGGGTTTACATGCCACCACGCTCCGCGCCGTCTCCGTTCCACGTGTCGGTGTCGCACGGCTGTGTGTTCCCCTCGTCATCGCCGAATAACTCTATGAATTGTACTGGTATTACAGGTGGGAGATCTGCAGGTGCAGGGATGGTTCCCTATGGGGGCAGTGCAGGGGATTCGGCATCCACATTGTCGTCCGTCGGGTCGCCACAATCAGCGTCTAGGGTCAACGGCCGGGTCGACGGGCCGTCCTTGAGTCGGTTCTCCAAGGTGGAAGCTGGGCCCAATTTCGATGATTCCCTGGGTTTGGATTTGCATCTCAGCCTTGCACCAGCTGCGCCGTGA 951 0.5405 MVAKRKSKRQTQCLGSPEHSRVVFPYFTPFLFSLGFSLTLSDLYSKFLTLIQISAMEDPIDHYQTKRTNPTNSTTRVKLFGFNVQEDMEDEAVVLEDVSDSTGKPATPSGSPDSGCGGGAAFLPSSGDRKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVPFVRNPIISAFAPPQHLLAPNGSVVLPAAPASWVYMPPRSAPSPFHVSVSHGCVFPSSSPNNSMNCTGITGGRSAGAGMVPYGGSAGDSASTLSSVGSPQSASRVNGRVDGPSLSRFSKVEAGPNFDDSLGLDLHLSLAPAAP 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0816 316 SUPERFAMILY beta-beta-alpha zinc fingers 127 158 IPR036236 -
Lele56g0816 316 PANTHER ZINC FINGER PROTEIN 5 66 315 IPR044299 GO:0010090
Lele56g0816 316 MobiDBLite consensus disorder prediction 261 281 - -
Lele56g0816 316 MobiDBLite consensus disorder prediction 97 118 - -
Lele56g0816 316 ProSiteProfiles Zinc finger C2H2 type domain profile. 131 158 IPR013087 -
Lele56g0816 316 Gene3D Classic Zinc Finger 123 176 - -
Lele56g0816 316 MobiDBLite consensus disorder prediction 261 289 - -
Lele56g0816 316 FunFam Zinc finger protein 6 123 181 - -
Lele56g0816 316 ProSitePatterns Zinc finger C2H2 type domain signature. 133 153 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0816 Lele-ChrLele56 6315584 6318287 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0816 73 314 C2H2 Transcription Factor Family AT1G68360 46.875 4.19e-53 172