Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0811 ATGTCAGCTATAACAAAGAGAGATATTAAGATGTGTTCTAAAGAAGAAGAGAGTGGTACTGAAATGAGAAGAGGCCCTTGGACCCTTGAAGAAGACAGCCTCCTCATTCACTATATCGCTCGCCATGGCGAAGGTCGCTGGAATATGTTAGCCAAAAGTGCAGGATTGAAGAGGAATGGGAAGAGTTGCAGACTGAGATGGCTGAATTACTTGAAACCAGATATCAAGAGAGGAAATCTTACCCCACAAGAACAGCTTTCGATCCTAGATCTTCATTCTCGGTGGGGTAACAGGTGGTCAAAAATTGCTCAGCATCTTCCAGGAAGAACTGATAATGAGATCAAGAACTATTGGAGAACCAGAGTTCAGAAACAAGCTCGCCAACTTAATATTGAATCTGGAAGCAAGAAATTCATCGATGCGATTCGATATTTCTGGATGCCAAGATTAGCTCAAAAGGTTGAACAGAAGCAGAGTTCTCCTTCAACTACCTTGATTTCTTCGCTAACAGCAGACACGAACCTTCATGTTTCTTCTTCATTATCTTCTCCAATGTTGTCAGCCAACAACAACTCTGTTATACCTTATTCTCTGTCTTCTTCACCACCACCATCATCATCTTTCCAGCAGCCTGCTGCAAAATTTCCTGGCAGCTTCTGTTCCAATAATCCCAGCAATTTTCCATCATCTGCAGATTCCTGGCAATTCTGGCAGCAGCAGATTCTGGGACCTTCTTCTTCAGAAATCCCAGCTAGCCCTTCTTGTTATATGTTGGAGAACAATAATAATGCTTGTTACAGCAACCAAATTCAGGAAAACTTGTTGGGGATGAACAATATGATAGCTACTTCTTTTGGGTATGGAATGGATAATAACAATCTGATGAACCTGCAGCAAGAACCAGCGACGACGACAATGATGGAAACTTACGACATGTTGCCGTTTGATTATTATTATTATTATCATCCGCCAACTACAGCAGAAAGTGACTGGACAACGTTAGGAAACATGGCAGAAACTTTATGGAACATGGAAGCTCTGTAA 1044 0.4167 MSAITKRDIKMCSKEEESGTEMRRGPWTLEEDSLLIHYIARHGEGRWNMLAKSAGLKRNGKSCRLRWLNYLKPDIKRGNLTPQEQLSILDLHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQARQLNIESGSKKFIDAIRYFWMPRLAQKVEQKQSSPSTTLISSLTADTNLHVSSSLSSPMLSANNNSVIPYSLSSSPPPSSSFQQPAAKFPGSFCSNNPSNFPSSADSWQFWQQQILGPSSSEIPASPSCYMLENNNNACYSNQIQENLLGMNNMIATSFGYGMDNNNLMNLQQEPATTTMMETYDMLPFDYYYYYHPPTTAESDWTTLGNMAETLWNMEAL 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0811 347 FunFam MYB transcription factor 81 144 - -
Lele56g0811 347 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 23 71 IPR017930 -
Lele56g0811 347 MobiDBLite consensus disorder prediction 1 23 - -
Lele56g0811 347 Pfam Myb-like DNA-binding domain 77 120 IPR001005 -
Lele56g0811 347 Pfam Myb-like DNA-binding domain 24 71 IPR001005 -
Lele56g0811 347 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 39 48 IPR001345 GO:0003824
Lele56g0811 347 Gene3D - 24 76 - -
Lele56g0811 347 ProSiteProfiles Myb-like domain profile. 19 71 IPR001005 -
Lele56g0811 347 SMART sant 23 73 IPR001005 -
Lele56g0811 347 SMART sant 76 124 IPR001005 -
Lele56g0811 347 Gene3D - 80 125 - -
Lele56g0811 347 CDD SANT 26 71 IPR001005 -
Lele56g0811 347 CDD SANT 81 120 IPR001005 -
Lele56g0811 347 FunFam Myb transcription factor 24 76 - -
Lele56g0811 347 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 72 126 IPR017930 -
Lele56g0811 347 MobiDBLite consensus disorder prediction 8 23 - -
Lele56g0811 347 ProSiteProfiles Myb-like domain profile. 72 122 IPR001005 -
Lele56g0811 347 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 20 197 IPR044676 GO:0003700|GO:0006355|GO:0043565
Lele56g0811 347 SUPERFAMILY Homeodomain-like 22 118 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0811 Lele-ChrLele56 6244632 6245926 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0811 21 163 MYB Transcription Factor Family AT1G68320 79.021 5.06e-82 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele56g0811 Myb_DNA-binding 6.1e-14 CL0123