Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0807 ATGGAGCTTCCTTCTTCCTTCTCCATAGTTCACTCCCACCATTGCTCTGTTCCTGTTAGGTTTCAGGATTCTTCTTCTTCTTCGCTTACCCTTTTCCCTGCAACCACTTCTTCTTCTTATTGTTCTTCTTCCCGCAGGCCTCGTTGGCCCCGAATGGATGCTGACTCTGCCTATTACCGCCATCGTTGGAAAGACAAGGTGATTCTCATAATGGGTGCCACCGGCTGTGGGAAGTCACGCTTGTCCATCGACATCGCCACCCGTTGCGCCTGCTCGGAAATCATAAACGCAGATAAAATGCAACTTTACAGAGGACTCGACATCGCCACCAACAAGATTCCTTTTGGTGAACGGAACGGCATCCTGCACCACCTCCTCGGAGATGTCGACCCTGCAAACGGAGAGTTCTCGCCGTTGGAGTTTCGTTCAGTCGCCGGGTCCATCATTTCCGATATCACCTCGAGGAGGAAGCTTCCCATCGTTGCCGGTGGCTCGAACTCGTTGATTCATGCTCTTGTTGTGGACCAGTTTGACCCGGCGTTAAATGTGTTCGATGAAGGATCGTTACCGAGTTTGATCTCATCCGAGTTGAGGTACAACTGTTGCTTCCTCTGGGTGGACGTATCGGTCCCTGTGTTATCAGATTACTTGTTGAAACGAGTCGACGACATGCTCGAGATGGGAATGGCGGACGAGTTGGCGCTGTTCTTCGACCCGGAAGCAAGCGACCTAGAAGATGACTCAGAGAACCGGGTCGGGTTAAGGAAGGCAATCGGAGTACCCGAATTCGACCGGTATTTTAAGCGATATCCACCATCGGGTGTGTTGAGAAGGGAAGAGGATCGGCTTCGGAAGGCCGCATACGAGGAGGCAGTGAGGGCGATAAAGGAGAACACTTGCCGGCTAGCGAAAAGGCAAATTGGGAAGATCTTGCGGCTTAAAGAAGCAGGGTGGGACCTACGGAGGCTGGACGCCACAGAGTCGTTCCGAGCGGCGATGACGCAGTCGAAATGCTCCGACGGCCGCGGCGAGAGATGGTCAGATATTTGGGAGAGACAGGTGGCAGAACCAAGCGTGAAGATTGTGAAGAGGTTCTTGAAGGAGTAG 1107 0.5276 MELPSSFSIVHSHHCSVPVRFQDSSSSSLTLFPATTSSSYCSSSRRPRWPRMDADSAYYRHRWKDKVILIMGATGCGKSRLSIDIATRCACSEIINADKMQLYRGLDIATNKIPFGERNGILHHLLGDVDPANGEFSPLEFRSVAGSIISDITSRRKLPIVAGGSNSLIHALVVDQFDPALNVFDEGSLPSLISSELRYNCCFLWVDVSVPVLSDYLLKRVDDMLEMGMADELALFFDPEASDLEDDSENRVGLRKAIGVPEFDRYFKRYPPSGVLRREEDRLRKAAYEEAVRAIKENTCRLAKRQIGKILRLKEAGWDLRRLDATESFRAAMTQSKCSDGRGERWSDIWERQVAEPSVKIVKRFLKE 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0807 368 Pfam IPP transferase 197 307 - -
Lele56g0807 368 Pfam IPP transferase 101 176 - -
Lele56g0807 368 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 67 179 IPR027417 -
Lele56g0807 368 FunFam Adenylate isopentenyltransferase 210 320 - -
Lele56g0807 368 Gene3D - 64 366 IPR027417 -
Lele56g0807 368 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 64 366 IPR039657 -
Lele56g0807 368 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 210 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0807 Lele-ChrLele56 6203443 6204549 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0807 198 367 C2H2 Transcription Factor Family AT2G27760 28.497 1.84e-11 63.2