Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0794 ATGACGAACCCTCTGACGAACCTCACAAAACCTGGGAACCTGATGAATTTCCCCAAAACAGTAAAGCAAAAGCCTCATGTTCTTCCCTTACGAAAGAAGCCTGTAATATCCAGAAAACTTCGGATTATTTATAACGATCCCGAAGCCACAGATTCATCTTCAAGCGAAGACGAAGAAGTGTGGCGAAGCAGAAAGCTGAAAAGGGTAAAACGATGCGTTCAAGAGCTCACCCTTCCTCCTCTTCCTGAGAAGCCTAAACCTGTTGTTAAAACCGAGAGCTTAAATCGTAACTCGAATGGCAAAGGAGTTAAAGAATTTGAACCAGTTAAACCTAAAGCACCAAGAAGACGTTGGTCTTCACAATACAGAGGCGTTCGACTGAGAAACTCGGGTAAATGGGCGTCGGAGATTCGTCATCCGATCAAGGGTCGTAAATGGTTGGGTACTTTTGATACTCCAGAGGAAGCTTCTCAAGCTTATGAAGCTAAAAGAAGAGAGTTTGAAGCCCTGGATTTCTCTAAGAAGAGCCCTCCTTCTGTTACTTTTTCTTCATATTCATCCTTTTCAGCGGAAGATTCCAGTAGTGTTATTTCTCAGTCATCATCACCTCCTTCTGTTCTTGAAGTCTATAATGGTCGAATTTCAAGCAAAGAAGTTGATAATTTCGAGTCTGCGCTTTCAGCTTTGCAAATGCCTGATTCAAGTTTGTCGAATTCATCAGCGGATTACAACAAGACTTCAGGTAATGAAGCGAGTGATTTGGCGTCTGAACTTGATTTGAGCTTATCAGAAGTGCCAATTCCAGTTTGTTCATCAGAGCCTAATCACCTGTATGAGCTTGATTGTTTGATGGTGAATGATTTGGATCAGAATTTTAAATATGACGATGATCTTTCTGGGTTGCTGGGTATTGGAATTTGTGGGTTAAACGATGATGTGCCTTGTGAACTTCCAGATTTCGATTTTGGAGATTTTGGTGAAGATGATGAGTTTACCGGTTGGATTGAGGACTCCCTCAACATACTGCCATGTGCATGA 1038 0.4191 MTNPLTNLTKPGNLMNFPKTVKQKPHVLPLRKKPVISRKLRIIYNDPEATDSSSSEDEEVWRSRKLKRVKRCVQELTLPPLPEKPKPVVKTESLNRNSNGKGVKEFEPVKPKAPRRRWSSQYRGVRLRNSGKWASEIRHPIKGRKWLGTFDTPEEASQAYEAKRREFEALDFSKKSPPSVTFSSYSSFSAEDSSSVISQSSSPPSVLEVYNGRISSKEVDNFESALSALQMPDSSLSNSSADYNKTSGNEASDLASELDLSLSEVPIPVCSSEPNHLYELDCLMVNDLDQNFKYDDDLSGLLGIGICGLNDDVPCELPDFDFGDFGEDDEFTGWIEDSLNILPCA 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0794 345 Pfam AP2 domain 121 169 IPR001471 GO:0003700|GO:0006355
Lele56g0794 345 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 38 232 - -
Lele56g0794 345 CDD AP2 120 162 IPR001471 GO:0003700|GO:0006355
Lele56g0794 345 MobiDBLite consensus disorder prediction 79 117 - -
Lele56g0794 345 Gene3D AP2/ERF domain 120 173 IPR036955 GO:0003700|GO:0006355
Lele56g0794 345 PRINTS Ethylene responsive element binding protein signature 122 133 IPR001471 GO:0003700|GO:0006355
Lele56g0794 345 PRINTS Ethylene responsive element binding protein signature 143 159 IPR001471 GO:0003700|GO:0006355
Lele56g0794 345 ProSiteProfiles AP2/ERF domain profile. 121 183 IPR001471 GO:0003700|GO:0006355
Lele56g0794 345 SUPERFAMILY DNA-binding domain 120 167 IPR016177 GO:0003677
Lele56g0794 345 SMART rav1_2 121 179 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0794 Lele-ChrLele56 6058059 6059096 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0794 28 324 AP2-EREBP Transcription Factor Family AT1G68550 34.106 3.77e-33 123