Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0781 ATGCAAAGCTTCAAGACCCCTCAACAACTCTATTTCCACCCCTCCTTCTTTCTTCGGGGAGATGGCGCGGACAGAAATCCAATGCGTTTCTCCGATCTTGGAGAGCTTCAACATTCCGTTTCTCCCATTCAACATGACGATGCTGTTGATTTAAGCTCAAGCTCTATGTTTACTGTGAAGTCCAGCAATGTCGCTGTTGTTCCTATTAACTTGCAATATGGGACATTGAGCTCGAACATCGGGTGTTCAGAGATTGCTTCGCCAGGGGCTGGGTGCCTTGATACCGGGCAGCATCTCACGTATCAGAAGGGACTCACGGCTGCCGGAGCCGTCGTGACGGTGGGGAACGGACATATGGAGAATTGGGGGGATTCCGGCATGGTAGATAATAGCCAACACACTGATACTTCCACGGATATCGATCCTGATGATAAAAACCAATGTAATAGAGTTCAGGCTGGGAGAGCCGTGGTTGCTGATTCCATCGATCAACCTAAGGCCAAACCTGAGGATCCAAAGACTCTTCGTAGGCTCGCCCAGAATCGAGAGGCTGCGAGGAAGAGTCGGTTGAGGAAAAAGGCATATGTACAGCAGTTGGAGAACAGTCGTGTGAGACTAGCACAACTCGAGCAAGAGCTTCAACGTACACGACAGCAGGGAATGCTTGTTGCAAGTGGATTTCCTAGTGATCATAGTCATTCAATGGTTGGAAACGGTGCTTTAGCATTCGACATGGACTATGCGCGCTGGGTCGATGAGCATCAACAGCTGATAAATGACCTAAGAGCGGCTGTTAATTCTCAAATGGGAGATAATGAACTGCAAATTGTTGTCGAGGGCGTTACAGCGCATTACGACGAGTTATTCAGGTTAAAGAGCATCGGGGCGAAGGCTGATGTATTTCACATGCTCTATGGTATGTGGCAGACACCTGCAGAAAGATGTTTTATGTGGTTAGGTGGGTTTCGATCATCTGAACTTCTTAAGATACTGAGGAACGAGCTTGAGCCATCAACAGAGCAGCAATTGGTGGGGTTGTATAATTTGCAGCAATCTTCATTGCAGGCTGAGGATGCTTTATCACAAGGCATGGAAGCATTGCATCAATCTCTTTCAGAGACACTTTCCTCAACCTCCCTCGGACCCGCCGGTTCAGGAAATGTCGCCGAATACATGGGTCAAATGGCACTTGCTATGAGCAAACTCGCCACGTTGGAGAGTTTCCTACATCAGGCTGATCTCTTGAGGCAACAAACACTGCAACAACTGCAAAAAATCTTAACCACACGACAAACCGCACGTGCATTCCTCGTGATAAATGACTACATTTTGCGACTACGAGCACTTAGTTCATTATGGTTAGCTCGTCCTAGAGATGGTGTTCTAGAATCCAAATCTCAATCTTACTCCAGATTTCAACTTCTGATCAAAGCTGCCCATAAACAAACAGAAATGGACACCCCAGTTCCTTTGCAGATCAAAGAACATGAAAGTTTATGA 1500 0.4693 MQSFKTPQQLYFHPSFFLRGDGADRNPMRFSDLGELQHSVSPIQHDDAVDLSSSSMFTVKSSNVAVVPINLQYGTLSSNIGCSEIASPGAGCLDTGQHLTYQKGLTAAGAVVTVGNGHMENWGDSGMVDNSQHTDTSTDIDPDDKNQCNRVQAGRAVVADSIDQPKAKPEDPKTLRRLAQNREAARKSRLRKKAYVQQLENSRVRLAQLEQELQRTRQQGMLVASGFPSDHSHSMVGNGALAFDMDYARWVDEHQQLINDLRAAVNSQMGDNELQIVVEGVTAHYDELFRLKSIGAKADVFHMLYGMWQTPAERCFMWLGGFRSSELLKILRNELEPSTEQQLVGLYNLQQSSLQAEDALSQGMEALHQSLSETLSSTSLGPAGSGNVAEYMGQMALAMSKLATLESFLHQADLLRQQTLQQLQKILTTRQTARAFLVINDYILRLRALSSLWLARPRDGVLESKSQSYSRFQLLIKAAHKQTEMDTPVPLQIKEHESL 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0781 499 Pfam Seed dormancy control 258 332 IPR025422 GO:0006351|GO:0043565
Lele56g0781 499 ProSiteProfiles DOG1 domain profile. 240 456 IPR025422 GO:0006351|GO:0043565
Lele56g0781 499 SMART brlzneu 169 240 IPR004827 GO:0003700|GO:0006355
Lele56g0781 499 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 171 215 IPR004827 GO:0003700|GO:0006355
Lele56g0781 499 SUPERFAMILY Leucine zipper domain 173 217 IPR046347 GO:0003700|GO:0006355
Lele56g0781 499 MobiDBLite consensus disorder prediction 123 146 - -
Lele56g0781 499 CDD bZIP_HBP1b-like 173 220 - -
Lele56g0781 499 Coils Coil 192 219 - -
Lele56g0781 499 PANTHER TRANSCRIPTION FACTOR TGA9 118 458 - -
Lele56g0781 499 FunFam BZIP family transcription factor 172 221 - -
Lele56g0781 499 Pfam bZIP transcription factor 173 212 IPR004827 GO:0003700|GO:0006355
Lele56g0781 499 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 176 191 IPR004827 GO:0003700|GO:0006355
Lele56g0781 499 Gene3D - 172 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0781 Lele-ChrLele56 5971576 5975251 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0781 3 459 bZIP Transcription Factor Family AT1G68640 59.873 2.98e-170 486
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele56g0781 DOG1 5.3e-29 No_clan