Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0771 ATGCTAACCTTCACTTGTGAAGAAATAAGAACATCGTGGTTGGTGGATAAAAGCAGAATAGCAACCAAAATAAAGAGCGCTTCTGGGGCATTCGATCCTGAGGAGGTTAAATGGAAAAGCAATCCTACCAGAGCTTGCCCGAATTGTCAGCACATTATCGATAACAGTGATGTAACAAAAGAATGGCCTGGATTGCCAAAGGGCGTGAAATTTGATCCATCAGATCAAGATATAATATGCCACTTGCTTGCTAAAGTTGGTGTGGTGAATTCAAGACCTCATCCTTTCATTGATGAATTTATCACTACTCTTGAAGTGGAGGATGGAATTTGTTATACTCATCCAAAACATTTACCAGGTGTTAATCAAGATGGAAGTGCGGCCCACTTCTTCCATAGAGCGATCAAGGCTTACAATACCGGCAATCGAAAACGTAGGAAAATACATGGTCAGGATTCTGGTGACGTCCGCTGGCACAAGACCGGAAAAACTAAACCCGTCATGTTGGATGGGGTTCAGAAGGGCTGTAAAAAGATTATGGTTCTTTATATGACCATGGTTAGAGGCGGTAAAGCTGAGAAAACTAATTGGGTTATGCATCAATATCACCTTGGAACACAAGAGGATGAGAAGGAAGGAGAGTATGTTGTCTCTAAAGTTTTTTACCAGCAGCAGCAGCAGGTCAAATCAGGGAATAAAGATGACCTGGATATTCCTGCAAGCACGGCAGATATTCCCGAAAGTATGGAAAACAATGAAGCTACAACTGTGCAAGTTGATCCGGTCACCCCAAAATCAGTGACCCCAGATCCATCTTGTAACAAAAGACTACATTCAAACATCGATATTGGACTAGAATCACATTCTATTCCTCAGCATCCTTCGATGGATTGTGTAGAATATGCGTCTGAAGCAAGGGGTGAAGAGCCAAAAACTGATATGCTCAAGGAAGAAAATGAAAATAGTAATAGTAATGAAGGAACAGATAATAATGAAAATTATGACGATGATGATAATGAAGAACCTAAATGGTGGGATAGTGAGTCACAGCATCTATTGAATTCACAACAACTCGTCGAAGCATTGTCCTTGTGTGAGGACCTACTTGACAGCCAATCTCCCAATAGAGATGACAAAAGTGAAGAACACAAGGACCGAACCGGTCTTTCTGTCTATGCTCAACTAGGACCAGAGCATCTGAAAAAGGATCTTGAAGAGTGCCAAAATCTTTCAAATATAGAACTTGATACGCCTCCTGAGTTTCGACTAAGTCAGCTGGAGTTTGGTTCACAAGATAGCTACACTGCCTGGGGTGGCAGCAAGGCAGAGAACTGA 1335 0.418 MLTFTCEEIRTSWLVDKSRIATKIKSASGAFDPEEVKWKSNPTRACPNCQHIIDNSDVTKEWPGLPKGVKFDPSDQDIICHLLAKVGVVNSRPHPFIDEFITTLEVEDGICYTHPKHLPGVNQDGSAAHFFHRAIKAYNTGNRKRRKIHGQDSGDVRWHKTGKTKPVMLDGVQKGCKKIMVLYMTMVRGGKAEKTNWVMHQYHLGTQEDEKEGEYVVSKVFYQQQQQVKSGNKDDLDIPASTADIPESMENNEATTVQVDPVTPKSVTPDPSCNKRLHSNIDIGLESHSIPQHPSMDCVEYASEARGEEPKTDMLKEENENSNSNEGTDNNENYDDDDNEEPKWWDSESQHLLNSQQLVEALSLCEDLLDSQSPNRDDKSEEHKDRTGLSVYAQLGPEHLKKDLEECQNLSNIELDTPPEFRLSQLEFGSQDSYTAWGGSKAEN 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0771 444 MobiDBLite consensus disorder prediction 370 391 - -
Lele56g0771 444 MobiDBLite consensus disorder prediction 245 275 - -
Lele56g0771 444 SUPERFAMILY NAC domain 50 223 IPR036093 GO:0003677|GO:0006355
Lele56g0771 444 MobiDBLite consensus disorder prediction 227 278 - -
Lele56g0771 444 MobiDBLite consensus disorder prediction 371 388 - -
Lele56g0771 444 FunFam NAC domain-containing protein 8 74 227 - -
Lele56g0771 444 Pfam No apical meristem (NAM) protein 66 204 IPR003441 GO:0003677|GO:0006355
Lele56g0771 444 MobiDBLite consensus disorder prediction 303 344 - -
Lele56g0771 444 MobiDBLite consensus disorder prediction 303 323 - -
Lele56g0771 444 ProSiteProfiles NAC domain profile. 65 223 IPR003441 GO:0003677|GO:0006355
Lele56g0771 444 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 11 408 IPR044799 GO:0003700
Lele56g0771 444 Gene3D NAC domain 74 228 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0771 Lele-ChrLele56 5843898 5849990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0771 12 232 NAC Transcription Factor Family AT4G28500 51.101 1.27e-71 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele56g0771 NAM 6.8e-20 No_clan