Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0746 ATGTTTCTTGTGCTTGTGTTTATGACTTTTCTTTCTTCTCCTGTGCCTGTGGGGAGGGGTGCTGGGGCTGGGGCTGGTGTGGCCATCAATGGTGAAGGAACAGGTGACGGTATTGGTGCTTTCTTTTTCGGTGCAGGTGCTGGTGCTGGCTTTTTCTTTGCTGGTGCTGGGGCAGGAGGCGTCTGGTCTGGGGTTGGGGCTATTGCTGGAGGTGGTAATGGTGGTGGTGAAGCAACTGGTGGTGGTGTTAATGGTGGTGGTAGTGGTGGTGGTGAAGCAACTGGTGGTGGTGTTAATGGTGGTGGTAGTGGTGGTGGCAGTATGGGAGTTGCTACAGGTGGAGCCTTTGGTGGTTGTGGTGGTGGAATCTTAGGAGGTGGGGATTTTGGGCTGATAGCTGGTGCAACCTTGGGTGCTGGGGGTTTGACAGGAGCAGAAGTGGGAGTTGCTGTTGGTGGTTTGCTCAAAGTAGGAGGGGTTGCTGCTACAGTTGGGGGTTTTGCAGCCACTAATGGTGCAGTAGCCAGGGAAGGCCTTGCAGCTGCAACTGGGGCTTTTGCAGCCGCCAATGGTGCAACAGACAAGGCAGGCCTTGCAGCCACAACAGGGGCTTTTGCAGCTGCCAATGGTGCAGCAGACAAGGCAGGCCTTGCAGCCACAACAGGGGCTTTTGCAGCTGCCAATGGTGCAGCAGACAAGGCTGGCGTTGCAGCCACAACGGGGGCTTTTGCAGTCACTAGTGGTGCAGCAGAAGTTGTAGGTGTATTAGCCACCACAGGAGGTTTTGCAGCCACTAATGGTGCAGCAGAGGAGGCAGGCCTTGCAGCTGGCACTTTGGAGGTTGCAGCAGAAGAGGCAGGCCTTGCAGCTGGCACTTTGGAGGTTGCAGGTGGCTGGGTTGCTGCCACAGAAGGGGCTTTTGTGGCTGCTACTGGCGCGGCAGAAGAGGCTGGCCTTGCAGCTGGCACTTTGGAGGTTGTAGGTGCCTGGGTTGCAGCCGGTGGCTTCCAAGAAGTGGATGGTGTTGCTGCCACAACAGGGGGTTTCATGGCTGCTACTGGTGCGGTGGAAGAGGCTGCCCTTGCAGCAGCGGGAACACTAATCGGCAAGTTAGAAGGTCCTGCCGGTGTTTTGGTTGGTAACTTCGAGTGTGTAGCTTGTGGGGCTTGGGCATTGCTGAGGGCCAGAGTCCAGCAGAGGCAAGCCAAGGCCAATACCCAGAACTTTGCAGCCATTGCAGGACGGATTTCACAAGACAAGGATACCAATTGGATTTTGAGGCATCAAGAGAAAGTGTTCGGCGTCAGATTTCTGAAGGCACCGCTCCGCTTGCTGCATCCAGTGGAACGAGCATTTGCTCTGATTATTGATGGAAAATCTCTTGTTTATGCTCTAGAGGATGGAATGAAGAACATGTTTCTGGAGCTTGCACTTAGTTGCGCATCTGTTATCTGCTGTCGCCCCTCACCTAAGCAGAAGGCACTGGTCACTAGACTGGTTAAATCTGGAACTGGAAAAGCCACATTAGCTATTGGTGACGGAGCCAATGATGTGGGGATCCTTCAAGAGGCAGATATAGGGATCGGAATCAGTGGGTATGAAGGAATGCAGGCTGTTATGTCTAGTGCTGTTGCAATTGCACAGTTTAGATATTTGGAACGGTTACACATTGGTATATGTTACTTTTTCTACAAGAACATCACGTTTGGCTTCACTCTGTTCTTGTATGAGGTGTATTCTTCATTCTCTGCACAACCTGCATGCAATGACAGGTTCTTTTCTCTCTATAATGTCTTCTTCTCTTCACTTCCCGTGATTGCCCTCGGTGTATTCGACCAAGATGTCTCTGCCCGGTACTGTCTTAAGTTTCCTTTGCTGTATCAAGAAGGAGTACAGAATGTGCTCTTCAGTTGGCGCCGTATGTTCAGTTGGATGCTTAACGGATTCGTCAGGGCCATAATAATCTTCTTCTTCAGCACGAAAGCAATGGATCTTCAGGCCTTCGACAAGGAAGGAAGAACTGCAGGGAGAGACATTCTTGGAGCAACAATGTATACCTGTGTTGTCTGGGTTGTCAACTTGCAAATGGCACTTGCCATAAGCTACTTCCCCTTGATACAACATATCTTCATCTGGCGTTCCATTGCTTTTTGGTACATTTTCCTTATGATATATGAAGCAATGAGTCCTTCATTTTCAACAAATACTTACAAAGTCTTCCTCGAAATTCTCGCTCCCTCGCCTTCCTTCTGGCTCGTGACAATCTTCGTCGTGATCTCAACTCTCACCCCATATTTCTCATGCTCAGCTATTCAGATGAGGTTCTTCCCATTGTATCATGAAATGGTCCAGTGGGTGAGGCCTGAAGGGAAGACCAATGATCCTGAGTATTGTGACATGGTGAGGCAGAGATCATTGAGGGCGACAACTGTCGGTTCGACAGCTCGAGTTACAGTTTGTGTACATCAGCATATAAAACTTAGGTGA 2487 0.5054 MFLVLVFMTFLSSPVPVGRGAGAGAGVAINGEGTGDGIGAFFFGAGAGAGFFFAGAGAGGVWSGVGAIAGGGNGGGEATGGGVNGGGSGGGEATGGGVNGGGSGGGSMGVATGGAFGGCGGGILGGGDFGLIAGATLGAGGLTGAEVGVAVGGLLKVGGVAATVGGFAATNGAVAREGLAAATGAFAAANGATDKAGLAATTGAFAAANGAADKAGLAATTGAFAAANGAADKAGVAATTGAFAVTSGAAEVVGVLATTGGFAATNGAAEEAGLAAGTLEVAAEEAGLAAGTLEVAGGWVAATEGAFVAATGAAEEAGLAAGTLEVVGAWVAAGGFQEVDGVAATTGGFMAATGAVEEAALAAAGTLIGKLEGPAGVLVGNFECVACGAWALLRARVQQRQAKANTQNFAAIAGRISQDKDTNWILRHQEKVFGVRFLKAPLRLLHPVERAFALIIDGKSLVYALEDGMKNMFLELALSCASVICCRPSPKQKALVTRLVKSGTGKATLAIGDGANDVGILQEADIGIGISGYEGMQAVMSSAVAIAQFRYLERLHIGICYFFYKNITFGFTLFLYEVYSSFSAQPACNDRFFSLYNVFFSSLPVIALGVFDQDVSARYCLKFPLLYQEGVQNVLFSWRRMFSWMLNGFVRAIIIFFFSTKAMDLQAFDKEGRTAGRDILGATMYTCVVWVVNLQMALAISYFPLIQHIFIWRSIAFWYIFLMIYEAMSPSFSTNTYKVFLEILAPSPSFWLVTIFVVISTLTPYFSCSAIQMRFFPLYHEMVQWVRPEGKTNDPEYCDMVRQRSLRATTVGSTARVTVCVHQHIKLR 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0746 828 Pfam Phospholipid-translocating P-type ATPase C-terminal 539 777 IPR032630 -
Lele56g0746 828 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 448 787 - -
Lele56g0746 828 Gene3D - 395 551 IPR023214 -
Lele56g0746 828 SUPERFAMILY HAD-like 437 555 IPR036412 -
Lele56g0746 828 SUPERFAMILY Calcium ATPase, transmembrane domain M 551 777 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0746 Lele-ChrLele56 5631448 5642851 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0746 451 823 Primary Pumps ATPases AT3G25610 72.208 0.0 596