Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0738 ATGGCACAAGATACTTCTGCTGTTGATTCACATCACAGGCTCCCTGGTCTATTGAAAGATCAAGTTTGCTTGGTTAAAAGGAAAGACTGTGATCGCTATAAGATTGCTCCAATCCAAGATCAGCTATCATTTGAGAAGGGTTTTTTTGTAGTAATCCGTGCATGCCAGTTGTTGTCCCAAAATAATGATGGAATAATATTGGTAGGGTTGGCTGGTCCTTCGGGGGCCAGGAAGACTGTATTCACTGACAAAATAGTCAATTTCATGCCCAGCATTGCAGTCATTTCGATGGACAATTACAATGATTCTAGTCGAATTATTGATGGAAATTTTGATGATCCACGCTTGACGGACTATGACACATTGCTCAAGAATCTACAAGATTTAAAGGCAGGAAAGTCAGTTCAGGTTCCAATCTATGATTTCAAGTCCAGTTCTCGTATATGTACAGTCGAAGTCCCGAGCTCCCGAATTGTGATCATAGAGGGTATCTATGCCTTGAGTGAGAAGTTGCGACCTCTGCTGGACCTTCGTATATCTGTTAAAGGTGGAGTTCATTTTGACCTGGTCAAGCGAGTTATACGAGACATTCAACGTGCTAGTATTTCCAATGTACAAGGTCTTTATCGAGCAATATCTGCAGACAGCACATATCAAAATAATCAACAAGTTCAATCCATTTACTGGGTTACAGAGTCCTACTTACATATTGAAAATGGAATATCATATTTACAATCAATTGTATGGGATTTGAAATGCAGTTCACTGTTTGCATTGGAACGGAGTCTTATGAACTTGTCTGCAAGATATGAAGATGGACGCATAGAAAAGGACTTTTATGTCCACATTGTTGTTGTCATTATCCACGCTTCTTAG 876 0.3973 MAQDTSAVDSHHRLPGLLKDQVCLVKRKDCDRYKIAPIQDQLSFEKGFFVVIRACQLLSQNNDGIILVGLAGPSGARKTVFTDKIVNFMPSIAVISMDNYNDSSRIIDGNFDDPRLTDYDTLLKNLQDLKAGKSVQVPIYDFKSSSRICTVEVPSSRIVIIEGIYALSEKLRPLLDLRISVKGGVHFDLVKRVIRDIQRASISNVQGLYRAISADSTYQNNQQVQSIYWVTESYLHIENGISYLQSIVWDLKCSSLFALERSLMNLSARYEDGRIEKDFYVHIVVVIIHAS 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0738 291 PANTHER URIDINE KINASE 32 210 - -
Lele56g0738 291 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 53 196 IPR027417 -
Lele56g0738 291 Gene3D - 66 235 IPR027417 -
Lele56g0738 291 PRINTS Uridine kinase signature 186 196 - -
Lele56g0738 291 PRINTS Uridine kinase signature 132 147 - -
Lele56g0738 291 PRINTS Uridine kinase signature 65 82 - -
Lele56g0738 291 CDD UMPK_like 67 203 - -
Lele56g0738 291 Pfam Phosphoribulokinase / Uridine kinase family 68 198 IPR006083 GO:0005524|GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0738 Lele-ChrLele56 5576097 5580222 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0738 66 196 PRT Gene Family AT5G40870 28.873 2.91e-12 64.7