Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0712 ATGATTGGAAAAGGAGTGGTAGGAGAGCGCTTTCAACCTCGGACATGTTCTGGGAATATTGCACCCAAAACTGGTCAGGCAAAAGAGTATTCCAAAAATGTTGTTATTGACGTAGATGGTGATCAAGTTGATGACGTGGTAATTATAGATTTTCCCGATTTTGTGCAACAAAAGTCACATGGCTGTAGTGTGCAGAGTAGAGACAGAAAGTGTCCGCTTCAGAGTGTCATCAGCATTGATGATGATGATGATGATGATGATGAGAGCGATGAAGCAGACCATGCTGAAATTATAGCAGAAGGTGGTGGGGAATTGGATAGTGATGCCTCCTCAAGCAAAAGATTTTCTCCTGCTCCAGGCTTTACGGGAAATTCTGTACATCTAGATAATGATGACTGCCCTGTTACCTTTGAAAAAGGTTCTCCATCTAAATTGCCAGAAAGTAGGAAATCAAGCTCTGCACAGGCTCCTGACAGAAATCGATATGGTTTAGATTCCTCTGAAAGTGAATCATCCGAGAGTGATTGTTCTGACTGTGAACTTATGGAAGTTTGCGAACAATGGGAAAAGGCTTCTCAAAGAAGACGCAATATCTTTAATGATCGACCTCGTTTTGATGAGCAGGCCAGTTCTTCTGGTTTGCATAGTAATTCTAATGCTGATATCGAAATGGAAAATAGGACAGGACAGGATGCAGGAACTTCCTTATATTCTGGTCTCAGCAATGGTAAATGTGCGATGAACCTAGCCCATACGGTTAACAACCAAACAGATGATGTTGATCCCAATGTAGGGAAAGAACATCCTTGTAAAGATTTTGATAAGAAAATCGACCAAGAGAGTTCTATATACCAGAGATCTGATTCTCTGTGTGAAGAAACAACAAGGAGTGAAGAATTCTACCATTTCTCCAAGCATAATGGTTATAATGTAGCTAGTGAGTTCAATAAAGATGCCGGTGATAAATATTCTAAATTTATGAGCTCCACCCAAGAAGAAAGCAAAAGACAAATTGAGAGTGATGGGTCTGGATTAAGGAACAGGGATGCCAATTTTCCCGACACACATTCTAGCTGTGCCTCTTTTGATGAAATACAACTTAACCAGGATGGGCCTGTTTCTCAAGGATGTGGTGCGAGGGATATAATTAATGAAAGAGAAAAACTTAAGGAAACTGACGAATATAAGCAAGCCATTGAAGAGGAATGGGCATCCAGGCAACGACAGTTGCAAATTCAGGCAGAGGAGGCACAAAGGTTGCGTAAAAGAAAAAAGGCTGACAGTAAACGTTTATTGGATATGCAAAGAAGGCAAAAGGAACGGATTGAAGAAGTCAGAGAGACTCAGAAGAAGGATGAGGAAAATATGAACATTAAAGAGCAACTGCGGATTGAAATAAGGAAAGAGCTTAATAAATTGGAGATAACATGCGTTGACATGGCTTCATTGCTCCGTGGCTTAGGAGTACAAGTGGGCGGAGGCTTTAGCCCCTTGCCACAAGAGGTGCATGCTGCTTATAAACGGGCCTTGCTGAGGTTTCATCCGGATCGGGCATCGAAAACTGACATTCGACAGCAGGTGGAGGCTGAGGAGAAGTTCAAGCTCATCTCTCGCATGAAGGAGAAATTTTTGACAACTTCATGTTTCTGA 1650 0.4176 MIGKGVVGERFQPRTCSGNIAPKTGQAKEYSKNVVIDVDGDQVDDVVIIDFPDFVQQKSHGCSVQSRDRKCPLQSVISIDDDDDDDDESDEADHAEIIAEGGGELDSDASSSKRFSPAPGFTGNSVHLDNDDCPVTFEKGSPSKLPESRKSSSAQAPDRNRYGLDSSESESSESDCSDCELMEVCEQWEKASQRRRNIFNDRPRFDEQASSSGLHSNSNADIEMENRTGQDAGTSLYSGLSNGKCAMNLAHTVNNQTDDVDPNVGKEHPCKDFDKKIDQESSIYQRSDSLCEETTRSEEFYHFSKHNGYNVASEFNKDAGDKYSKFMSSTQEESKRQIESDGSGLRNRDANFPDTHSSCASFDEIQLNQDGPVSQGCGARDIINEREKLKETDEYKQAIEEEWASRQRQLQIQAEEAQRLRKRKKADSKRLLDMQRRQKERIEEVRETQKKDEENMNIKEQLRIEIRKELNKLEITCVDMASLLRGLGVQVGGGFSPLPQEVHAAYKRALLRFHPDRASKTDIRQQVEAEEKFKLISRMKEKFLTTSCF 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0712 549 ProSiteProfiles dnaJ domain profile. 482 549 IPR001623 -
Lele56g0712 549 Coils Coil 382 402 - -
Lele56g0712 549 MobiDBLite consensus disorder prediction 146 162 - -
Lele56g0712 549 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 546 - -
Lele56g0712 549 MobiDBLite consensus disorder prediction 329 356 - -
Lele56g0712 549 MobiDBLite consensus disorder prediction 204 231 - -
Lele56g0712 549 Gene3D DnaJ domain 498 543 IPR036869 -
Lele56g0712 549 MobiDBLite consensus disorder prediction 329 343 - -
Lele56g0712 549 MobiDBLite consensus disorder prediction 77 178 - -
Lele56g0712 549 CDD DnaJ 499 537 IPR001623 -
Lele56g0712 549 SUPERFAMILY Chaperone J-domain 439 541 IPR036869 -
Lele56g0712 549 Coils Coil 432 455 - -
Lele56g0712 549 MobiDBLite consensus disorder prediction 199 231 - -
Lele56g0712 549 Coils Coil 407 427 - -
Lele56g0712 549 MobiDBLite consensus disorder prediction 78 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0712 Lele-ChrLele56 5349640 5352179 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0722 53 17299732 17302351 Lele56g0712 56 5349640 5352179 hybridization
Lele54g0722 54 14153978 14156522 Lele56g0712 56 5349640 5352179 hybridization