Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0706 ATGGAATCTTGGAGTTATGCCTCAGAAGAGAAACGCTATTTGTTTTCAGATGAAATGGATTTCTCGCTGGATGCTTATATGAGAAGTAGAAGAGCAATGGTTGAATGGGACAATAATAAAGCCTCTTCTTATATCTTTGAGAAAGATGGGTTTATTTCAGATAAAGAGGTAATTAAAAGCTTTGAGTTTGTGGATTTAGGGTTTCCTGATTTGTTCAGAAGGCCTGTTCATGGTAGCCAGCCACCACTGGAGGCATCAAACTATGAACAAGACAGTGATTCTAGTAAGAAAGTTAATTCCTCTACTCATGTTATTGCTCTGAATTCAGCTTTGGGAGAAGTAGAATCTGAGTCAAGGCACTCATTTTCTCTAGTTGAATCTAAGATTCGTGATTCTTCACTGATTGATTTAAAGCTAGGGAGGTTAGGAGATTGTAAAGATGCAAGTAGTGATAAAAATGACAATGAGGGGTTCGCTTTTCAACCTATGCATCCGGTATCGGCACTTACAAAGAGAGCTCAAACTTCTTCCAGCTTACCTACTCAAACACGTGTTTGTCAAGTTTATGGTTGTCACAAGGATCTTAGCTCTTCAAAAGAGTACCACAAAAGGCATAAAGTTTGTGATGTGCATTCAAAGACAGCCAAAGCTTTTGTTAATGGCATTGAACAAAGGTTTTGTCAGCAGTGCAGCAGGTTCCATCTGCTAGCTGAGTTTGATGATGGCAAGCGCAGTTGTCGTAGACGCCTAGCTGGACACAATGAACGTCGAAGGAAGTCTCAGTTTGATTACATGTCTGGTAAACCACATAAGATACTGCAGTCGTGTCAAGGTACCAAATATTTTGGGGCTTCATTACAGAAGAGACCCCAATTTGCCTTCCACGATGTGTTTCAAAGTGGCGGTTTTTACGCAGGAAAGTATGAACATAGCAATCATCAGATTGGACACATCAAGTTGGAAGATGAATCAATTTACAGTTCTCAATTAGCAAATGGTCTAGAGTTATCCAGGGCCTCCAACTCCAGAAGTTGTGCTCTCTCTCTTCTGTCAGCTCAGTCACAGGATCTAACAACACGCGGCTCGGCTGGTTCCCTTATTTCTCAACGTATCTGCTCACAGCACAGTGATGGCCAAGTTTCTGAAACACCTTTTGGTATAAGCTCTCTGGATAAAAATGTCCCAAGTCAGTCCTTTTCATGTGAGATAAACTCCATGGAAATTACCAAGAGCAGTCCCATAATGCCTTCTGATGTTGTTGGCCATGCTCTTCAACTTGAAGTCCATGGAGATGATGATACTTACAAACCATCAAATCTGTTAAATTCCAAATATCATCCTCCTGTTGAACATAGCTCCACCGTTGATCTGTTCCAATTGTCATCCCATCTTCAAAGGGTGGAGCAGCAAAGAAATTCTGTTCAAGTGAAGCACGAAAACGAGGATGGCTGCCTTTTCCCAACCATGTGA 1470 0.4129 MESWSYASEEKRYLFSDEMDFSLDAYMRSRRAMVEWDNNKASSYIFEKDGFISDKEVIKSFEFVDLGFPDLFRRPVHGSQPPLEASNYEQDSDSSKKVNSSTHVIALNSALGEVESESRHSFSLVESKIRDSSLIDLKLGRLGDCKDASSDKNDNEGFAFQPMHPVSALTKRAQTSSSLPTQTRVCQVYGCHKDLSSSKEYHKRHKVCDVHSKTAKAFVNGIEQRFCQQCSRFHLLAEFDDGKRSCRRRLAGHNERRRKSQFDYMSGKPHKILQSCQGTKYFGASLQKRPQFAFHDVFQSGGFYAGKYEHSNHQIGHIKLEDESIYSSQLANGLELSRASNSRSCALSLLSAQSQDLTTRGSAGSLISQRICSQHSDGQVSETPFGISSLDKNVPSQSFSCEINSMEITKSSPIMPSDVVGHALQLEVHGDDDTYKPSNLLNSKYHPPVEHSSTVDLFQLSSHLQRVEQQRNSVQVKHENEDGCLFPTM 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0706 489 ProSiteProfiles Zinc finger SBP-type profile. 183 260 IPR004333 GO:0003677
Lele56g0706 489 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 140 413 IPR044817 GO:0003677
Lele56g0706 489 SUPERFAMILY SBT domain 185 265 IPR036893 GO:0003677|GO:0005634
Lele56g0706 489 Pfam SBP domain 186 259 IPR004333 GO:0003677
Lele56g0706 489 Gene3D - 177 247 IPR036893 GO:0003677|GO:0005634
Lele56g0706 489 FunFam Squamosa promoter-binding-like protein 14 177 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0706 Lele-ChrLele56 5287925 5291103 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0706 135 487 SBP-box Gene Family AT1G69170 36.800 1.62e-55 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lele56g0706 SBP 2.5e-29 No_clan