Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0701 ATGAGCAGAAATCTAGGATACTGGGATTGCTTCATTGTCAAAGAAAAGGACAGAGAATCGGAGGAGTGGTTTTCTCATAAAGTTCTCTCTTCCTATCTCAATTATGAGCCATTAAATTCAGAGAGAGAGGAAGAGCCCTTGCTTGTTCAATCGCAATCAAATCATTCTTTACATGTGCAAATGGCTCTATCTTATGGGGATTTAGATAGAGGAGAGGTAAGGATTCATGAGAGTTTGGAAGAGCTAAAGACTGATTTGGCAGACTATATTGCTGATATATCAGAGGCTTCTGTGAAGGAAAGGGGAGTATTCGCCATCGCTTTATCTGGAGGCTCTCTCATCCGCTTAATCAGCAAACTCTCAGAAGCTCCTTATAGCAAGACAGTTGAGTGGGCCAAATGGTATATCTTCTGGGCTGATGATCGTCTTGAGGCGAAAAGCCATGCGGATAGCAATTATAAGCTTGCAAAAGATTGCCTTTTGTCCAAGGTGCCAGTCATCCCTAGTCATGTGCATTCCATCAATGATTCAGTGTCAGCAGAAGAGGCAGCTGAAGATTATGAGTTTCTAATAAGACAGTCAGTGAAAAATCGCATAGTGAGTGTATCTGACACAAGTGACGGCCCCAGTTTCGATCTCATCCTTCTTGAATTGGGTGTGGATGGCCATGTTGCCTCTCTATTTCCTAATGACTCAGCTTTGAAAGAGAAGGAACAATGGGTGACTTTCACTGCTGATTCCTCCAAACCCTCTCATGACAGAATCACATTCACTTTACCTGTTATCAATTCTGCATCCAACGTTGCAGTCATCGCCACAGGTGATAGTAAAGCAGATGCTGTACACTTGGCGGCCGATAAACTGGGGCCCGACTGCACCGTGGTACCGGTGAGGATGGTCCGGCCGGTGAAGGGTAGGTTAGTTTGGTTTTTGGATGAGCCAGCTGCTTCAAAACTTAACCTTCCCTGA 969 0.4458 MSRNLGYWDCFIVKEKDRESEEWFSHKVLSSYLNYEPLNSEREEEPLLVQSQSNHSLHVQMALSYGDLDRGEVRIHESLEELKTDLADYIADISEASVKERGVFAIALSGGSLIRLISKLSEAPYSKTVEWAKWYIFWADDRLEAKSHADSNYKLAKDCLLSKVPVIPSHVHSINDSVSAEEAAEDYEFLIRQSVKNRIVSVSDTSDGPSFDLILLELGVDGHVASLFPNDSALKEKEQWVTFTADSSKPSHDRITFTLPVINSASNVAVIATGDSKADAVHLAADKLGPDCTVVPVRMVRPVKGRLVWFLDEPAASKLNLP 322
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0701 322 CDD 6PGL 80 290 IPR005900 GO:0005975|GO:0006098|GO:0017057
Lele56g0701 322 Pfam Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 79 309 IPR006148 GO:0005975
Lele56g0701 322 SUPERFAMILY NagB/RpiA/CoA transferase-like 73 320 IPR037171 -
Lele56g0701 322 Gene3D - 69 320 - -
Lele56g0701 322 TIGRFAM pgl: 6-phosphogluconolactonase 75 319 IPR005900 GO:0005975|GO:0006098|GO:0017057
Lele56g0701 322 Coils Coil 79 99 - -
Lele56g0701 322 PANTHER 6-PHOSPHOGLUCONOLACTONASE 30 319 IPR039104 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele56g0701 Lele-ChrLele56 5250422 5253750 Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0735 53 17391095 17391556 Lele56g0701 56 5250422 5253750 hybridization
Lele54g0731 54 14248751 14251308 Lele56g0701 56 5250422 5253750 hybridization