LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele56g0689	ATGTCCTGCGAGAAAGAGAGAGAGGGCCACGTTTACCTGGCCAAGCTCGCCGAACAGGCTGAGAGATATGAGGAAATGGTTGACTCCATGAAGAAAGTAGCAAAGCTTGATCTTGATCTAACTGTGGAAGAGAGGAACCTCCTCTCAGTAGGGTATAAAAATGTCATTGGTTCACGACGAGCCTCATGGCGCATCATGTCTTCAATTGAACAGAAGGAAGAGTCTAAGGGAAACGAGCAAAATGTTAAACTGATCAAGAGTTATCGCCAAAAGGTTGAGGAGGAACTATCCAAGATTTGCAGTGACATTCTGACAATCATCGATGAGCATCTGGTTCCCTCTGCCGCATCAGGAGAAGCCACTGTTTTCTACTACAAAATGAAGGGTGACTATTATCGGTATCTTGCTGAGTTCAAGACTGACCAAGAAAAGAAAGATGCAGCTGATCAGTCAATGAAAGCATATGAGGCTGCCTCAGACACTGCAAACAAAGATCTTCCATCAACACACCCAATCCGTCTTGGACTTGCACTCAACTTCTCTGTCTTCCATTATGAGATCATGAATTCTCCTGAAAGGGCCTGTCAATTGGCTAAGCAAGCCTTTGATGAGGCAATTGCGGATTTAGACAGCCTGAGTGAAGAGTCATACAAGGACAGCACTTTGATCATGCAGTTGTTGAGAGACAACCTGACTCTTTGGACCTCTGATTTGCCTGAGGATGGAGGTGAAGATAGCAGCAAACCTGAAGAGTTCAAACCTGCTGAACCTGAGAAGGAGCAGAAGGAATAA	792	0.4508	MSCEKEREGHVYLAKLAEQAERYEEMVDSMKKVAKLDLDLTVEERNLLSVGYKNVIGSRRASWRIMSSIEQKEESKGNEQNVKLIKSYRQKVEEELSKICSDILTIIDEHLVPSAASGEATVFYYKMKGDYYRYLAEFKTDQEKKDAADQSMKAYEAASDTANKDLPSTHPIRLGLALNFSVFHYEIMNSPERACQLAKQAFDEAIADLDSLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGEDSSKPEEFKPAEPEKEQKE	263

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele56g0689	263	Coils	Coil	195	215	-	-
	Lele56g0689	263	SUPERFAMILY	14-3-3 protein	6	237	IPR036815	-
	Lele56g0689	263	FunFam	14-3-3 protein epsilon	2	248	-	-
	Lele56g0689	263	ProSitePatterns	14-3-3 proteins signature 1.	45	55	IPR023409	-
	Lele56g0689	263	MobiDBLite	consensus disorder prediction	235	263	-	-
	Lele56g0689	263	MobiDBLite	consensus disorder prediction	241	263	-	-
	Lele56g0689	263	ProSitePatterns	14-3-3 proteins signature 2.	217	236	IPR023409	-
	Lele56g0689	263	PIRSF	14-3-3	1	247	IPR000308	-
	Lele56g0689	263	Pfam	14-3-3 protein	13	235	IPR023410	-
	Lele56g0689	263	PANTHER	14-3-3 PROTEIN	7	237	IPR000308	-
	Lele56g0689	263	PRINTS	14-3-3 protein zeta signature	88	112	IPR000308	-
	Lele56g0689	263	PRINTS	14-3-3 protein zeta signature	181	207	IPR000308	-
	Lele56g0689	263	PRINTS	14-3-3 protein zeta signature	119	141	IPR000308	-
	Lele56g0689	263	PRINTS	14-3-3 protein zeta signature	154	180	IPR000308	-
	Lele56g0689	263	PRINTS	14-3-3 protein zeta signature	208	237	IPR000308	-
	Lele56g0689	263	PRINTS	14-3-3 protein zeta signature	39	68	IPR000308	-
	Lele56g0689	263	SMART	1433_4	7	248	IPR023410	-
	Lele56g0689	263	Gene3D	-	1	248	IPR036815	-
	Lele56g0689	263	Coils	Coil	13	33	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele56g0689	Lele-ChrLele56	5159882	5162279	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele56g0689	4	256	14-3-3 family	AT1G26480	80.233	1.46e-156	434

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lele53g0753	53	17508540	17511010	Lele56g0689	56	5159882	5162279	hybridization
	Lele54g0744	54	14341645	14343675	Lele56g0689	56	5159882	5162279	hybridization