Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0668 ATGCCGTCGGATGGCGCCGCCGCCATTGGACTTAAACAGGATATGCCTTCTGTTGAGCATCAGTCCCCGATGTTCATGCTTCCTCCGGGGCTTTTTCCAGTCTCTCAGGTCTCAGCTCAGGTCGTGCAGGTCAACGAGAATCCATCTTCGTCTTTATCGGCAGCTTCCATGGCTAAACAAGCTCATCAGATACCAGATTTTGGTACGACGTCGTCGTCGTCAATGAAGGAATGTCCTGACGATGGATTCAACTGGCGCAAGTATGGGCAAACACAGGTGAAAGGCAGTAAATTTCCTCGGAGTTATTACAAGTGCACGCATTTGAATTGCCTCGTGAAGAAGAAGGTGGAGAGATCCCTCGAAGATGAACATGTTATCGCCATCATTTACAAAGTACAACATAATCATCAAGCTCCTCGCTCCACCACCACCAACAACAACAAGCCCGCGACTGAGAACTCGAATAGTGTACGAGGAACAACAACGTGGGAGTCATCAACAGCTGAACATGAAGCAGAAGGATCAAGTGAGAGTGAGGAAGCAGATAATGAAGTGGAGGAGAAAAATAATGATGAGCCTGGGCGTAAGAGAAGGAGGCAAGAAGCTATGGTGGTGTCTAAGGGAGTGACTTGGCATAGGACAGCCATGGAATCAAGGATTATTGTGCAGACAACAAGTGAAGTTGCCTTGCTTGACGATGGATATCGATGGCGAAAATATGGCCAAAAAGTTGTCAAGGGCAACCCTTTCCCAAGGAGCTACTATAAGGGCACGACCGCAGGGTGCAATGTTCGGAAACATGTGGAGAGGGCATCCTCAGATCCTAAAGCTGTTATTACAACGTACGACGGAAAACACAATCACGACGTGCCTGCTGCTAAAACTAACAGCCACACGATTGCCAATAACTCATCTGCATCACAGCTAATAAGACCCCACAATCCCACAATACCAGATAGACACAGTTTCAATGGCGGACCTATTGGGTCCAACCACCACTACCAGCAACAACAACAACAACCTGTAGCACGTCTTAGGCTAAAGGAAGAACAGGTAACCTAG 1062 0.4783 MPSDGAAAIGLKQDMPSVEHQSPMFMLPPGLFPVSQVSAQVVQVNENPSSSLSAASMAKQAHQIPDFGTTSSSSMKECPDDGFNWRKYGQTQVKGSKFPRSYYKCTHLNCLVKKKVERSLEDEHVIAIIYKVQHNHQAPRSTTTNNNKPATENSNSVRGTTTWESSTAEHEAEGSSESEEADNEVEEKNNDEPGRKRRRQEAMVVSKGVTWHRTAMESRIIVQTTSEVALLDDGYRWRKYGQKVVKGNPFPRSYYKGTTAGCNVRKHVERASSDPKAVITTYDGKHNHDVPAAKTNSHTIANNSSASQLIRPHNPTIPDRHSFNGGPIGSNHHYQQQQQQPVARLRLKEEQVT 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0668 353 MobiDBLite consensus disorder prediction 136 169 - -
Lele56g0668 353 Pfam WRKY DNA -binding domain 80 137 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele56g0668 353 Pfam WRKY DNA -binding domain 232 289 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele56g0668 353 ProSiteProfiles WRKY domain profile. 226 291 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele56g0668 353 MobiDBLite consensus disorder prediction 136 204 - -
Lele56g0668 353 Gene3D WRKY domain 216 292 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele56g0668 353 Gene3D WRKY domain 67 140 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele56g0668 353 SMART WRKY_cls 79 138 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele56g0668 353 SMART WRKY_cls 231 290 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele56g0668 353 ProSiteProfiles WRKY domain profile. 74 139 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele56g0668 353 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 48 313 IPR044810 GO:0003700
Lele56g0668 353 FunFam WRKY transcription factor 68 140 - -
Lele56g0668 353 SUPERFAMILY WRKY DNA-binding domain 78 139 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele56g0668 353 MobiDBLite consensus disorder prediction 188 203 - -
Lele56g0668 353 MobiDBLite consensus disorder prediction 328 344 - -
Lele56g0668 353 FunFam WRKY transcription factor 57 217 291 - -
Lele56g0668 353 MobiDBLite consensus disorder prediction 308 353 - -
Lele56g0668 353 SUPERFAMILY WRKY DNA-binding domain 223 291 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0668 Lele-ChrLele56 5010805 5014208 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0668 24 353 WRKY Transcription Factor Family AT2G03340 45.763 5.67e-96 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele56g0668 WRKY 4.7e-24 CL0274