Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0641 ATGGATCTGCAAAACTTGCAAAATCAAAGCATGCATCTGGTTCTGTCCACTGATGCAAAGCCTAGGCTGAAATGGACTCCTGAGCTTCACCAACGATTTCTTGACGCCATTAATCAGCTTGGAGGAGCAGATAAGGCAACACCCAAGAGCCTTTTGAGAGTGATGGGCGTTCCCGGGCTTACTTTGTACCACCTGAAGAGCCACTTACAGAAATTCAGGCTTGGAAAAGGTCAGCAACTAGAAACCTGCTCTGACAGTAGTAATAAACAAGAAGAATGCCTATTCTCTAATGCTCTATTTGTTGCAGACCACAGAGAAATCCAGAGCAGTGTTAGCCATTGCAAAAGGGAAATCTGTGTTGGGACCCAGAATCAGATGACTGACTTGCAGATAGCACAGGCTCTTCAAATGCAAATGGAAGTTCAGGGGAAACTTTATGAACAGCTTGAGGTGCAGAGGCATTTGCAGCTTCGAATTGAAGCTCAAGGGAAGTATTTACAATCAGTGCTCAATAAAGCGCAGGAAACACTTGCTACTTATAGTTCTTCTTCCACTTCTGATACACAACTTGAAAAAGCTGAGCTTTCTCGGTTAGTATCCATGATCAACAATGCTTGTCCAAGTTCTCCGATCTCACAACTGACAGAAACAAGAGGGTTGAGTTCTAGAGATGGGAAGAGGAAGCAAAGCAGAGGGATTATGTGTTCACTGGAAAGTTCTTTGACATCTTCAGAGAGCTCTAGGATAAAGGAAGACAAGAAGCAGCTCAAGGATGAAACAGGAGACCTGAAAAAATCTAATAGTACTACTTCAGTTGAACTTCCATTAATGGCCAAACGTTTAGTGGATGAAGCATTAAATGGGGATGCAAGTGATGAATCTAGTAGGAGGAGGAGGAGAAGCGGAGGAGCCAATTATGATGGGGAAACATGTGCTAACAAGCAGAGAAAAATTGAATTGTCAGAAATGCTTGACTTGAACAGGCAATACCAGAGTGATAATGATTCAAATTCTAAGGCTATTGATTTGAATCACTGTTAA 1041 0.4236 MDLQNLQNQSMHLVLSTDAKPRLKWTPELHQRFLDAINQLGGADKATPKSLLRVMGVPGLTLYHLKSHLQKFRLGKGQQLETCSDSSNKQEECLFSNALFVADHREIQSSVSHCKREICVGTQNQMTDLQIAQALQMQMEVQGKLYEQLEVQRHLQLRIEAQGKYLQSVLNKAQETLATYSSSSTSDTQLEKAELSRLVSMINNACPSSPISQLTETRGLSSRDGKRKQSRGIMCSLESSLTSSESSRIKEDKKQLKDETGDLKKSNSTTSVELPLMAKRLVDEALNGDASDESSRRRRRSGGANYDGETCANKQRKIELSEMLDLNRQYQSDNDSNSKAIDLNHC 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0641 346 SUPERFAMILY Homeodomain-like 19 74 IPR009057 -
Lele56g0641 346 FunFam Myb family transcription factor 19 77 - -
Lele56g0641 346 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 7 271 IPR044848 GO:0003700
Lele56g0641 346 MobiDBLite consensus disorder prediction 284 310 - -
Lele56g0641 346 Pfam Myb-like DNA-binding domain 22 71 IPR001005 -
Lele56g0641 346 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 17 77 IPR017930 -
Lele56g0641 346 MobiDBLite consensus disorder prediction 245 264 - -
Lele56g0641 346 Gene3D - 19 77 - -
Lele56g0641 346 MobiDBLite consensus disorder prediction 285 304 - -
Lele56g0641 346 Pfam MYB-CC type transfactor, LHEQLE motif 129 176 IPR025756 -
Lele56g0641 346 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 20 75 IPR006447 GO:0003677
Lele56g0641 346 MobiDBLite consensus disorder prediction 210 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0641 Lele-ChrLele56 4796569 4798134 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0641 11 277 G2-like Transcription Factor Family AT1G69580 51.408 1.16e-70 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lele56g0641 Myb_DNA-binding 1.6e-06 CL0123