Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0639 ATGAAGGCAGCTTGGCGGAACGGCGTTCTATATTCTTCACAACCACACTCCAATAGTGCTCTTACCTGTTCTGATCTCTCGTCTTCTTCTATGGGGATGGTTCATGCAGACATGGGTTCTCTTTCTCTTTCTTCTTCTTCTGAAATGGGAAATAATAACAATATTGGGGGAACCAGCTTGGGTAGTACTTTTCCCTTTATTAGGGATCACCTTCCAAACAACAACATTGCCACCATCGATAATCTTGATAATGATGTTTTGGAGTGTAAAGCTTCTGAATCTAGTACTGATCATGAGAATCTCATAGATCATACCCAAGAAAACCCTAATGAGAATTCTGGTGTCAGTACGGGAAAAGAAGCTGATTCTGACCAGTCCAAGCTTTGCGCACGAGGACATTGGAGACCTGCAGAAGATGCCAAGCTCAAGGAGCTCGTTGCCCTCTATGGCCCTCAGAACTGGAACCTCATAGCGGAAAAATTGGAAGGAAGATCAGGTAAGAGCTGTAGGCTGAGGTGGTTCAACCAGTTGGATCCGAGGATAAACAGGAGAGCATTCAGTGAAGAGGAAGAAGAGAGATTAATGCAGGCACATAAGATATATGGGAATAAATGGGCCATGATTGCGAGGCTGTTTCCAGGAAGAACTGATAACGCAGTGAAGAATCACTGGCATGTTATAATGGCGAGGAAGTACAGAGAACAATCAAGTGCTTACAGAAGAAGAAGATTAAGCCAATCTGTAAGTTACGCAAGATCATCAATGGAGGACCAGAATTCAAGTAGAGCAAGCTCAGGGACGACAGAACCCCCACCACCTTTACCTTATTGTCTTGTCCCTAATAACAATAACATTATGGCTAGTTTCCCATATGCTCACTTCCATGGAGCTAATGTGGGGGTTGACTATGGTTTCAATGCTTCTTCTTCTTCACCCCACATGACTGCTGGATTAGAAGCATTCTCCAGTAGCAGCAAAAAGGCCCCTCATACTCACACCTCCTTTTATTCTCATCATCGTTGTCCATCTTTTGATGCCATCTCGGGTGTTAGCGTCATTGAGATGGAGGGAGGGGGTTTTGAGCAGAGTAGTTTATACAGGGAAAACAGGCAAAGTGATTATGAACTTCATTCTCTCAATGGCTTCTTTTACCCTCAAGAAGATAATTTCAACACATATATAATGCCAATAAAGCAGCAGCAGCAGCAACCACCACTGTCAAACTCAAACTCGATGAATCCCAGTTTTCACAGCTTCCCATCATCAAACTCCATGCCTCCAAATGTTTCCTCCGTTGAACCGTCATCGTCAGAGAACAGAGATAAAGTAGTACTGAATCGTCCTTCTCCCCCTTCATTTATCGACTTTCTCGGTGTTGGAGCCACATGA 1389 0.4384 MKAAWRNGVLYSSQPHSNSALTCSDLSSSSMGMVHADMGSLSLSSSSEMGNNNNIGGTSLGSTFPFIRDHLPNNNIATIDNLDNDVLECKASESSTDHENLIDHTQENPNENSGVSTGKEADSDQSKLCARGHWRPAEDAKLKELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEEEEERLMQAHKIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSSAYRRRRLSQSVSYARSSMEDQNSSRASSGTTEPPPPLPYCLVPNNNNIMASFPYAHFHGANVGVDYGFNASSSSPHMTAGLEAFSSSSKKAPHTHTSFYSHHRCPSFDAISGVSVIEMEGGGFEQSSLYRENRQSDYELHSLNGFFYPQEDNFNTYIMPIKQQQQQPPLSNSNSMNPSFHSFPSSNSMPPNVSSVEPSSSENRDKVVLNRPSPPSFIDFLGVGAT 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0639 462 MobiDBLite consensus disorder prediction 399 443 - -
Lele56g0639 462 MobiDBLite consensus disorder prediction 106 123 - -
Lele56g0639 462 PANTHER MYB PROTEIN-RELATED 131 311 - -
Lele56g0639 462 CDD SANT 134 175 IPR001005 -
Lele56g0639 462 MobiDBLite consensus disorder prediction 93 124 - -
Lele56g0639 462 FunFam MYB transcription factor 131 182 - -
Lele56g0639 462 CDD SANT 185 225 IPR001005 -
Lele56g0639 462 Gene3D - 131 182 - -
Lele56g0639 462 Pfam Myb-like DNA-binding domain 131 177 IPR001005 -
Lele56g0639 462 Pfam Myb-like DNA-binding domain 183 226 IPR001005 -
Lele56g0639 462 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 131 177 IPR017930 -
Lele56g0639 462 ProSiteProfiles Myb-like domain profile. 178 228 IPR001005 -
Lele56g0639 462 SMART sant 130 179 IPR001005 -
Lele56g0639 462 SMART sant 182 230 IPR001005 -
Lele56g0639 462 MobiDBLite consensus disorder prediction 249 274 - -
Lele56g0639 462 MobiDBLite consensus disorder prediction 399 446 - -
Lele56g0639 462 MobiDBLite consensus disorder prediction 249 267 - -
Lele56g0639 462 Gene3D - 184 258 - -
Lele56g0639 462 FunFam MYB transcription factor 184 255 - -
Lele56g0639 462 SUPERFAMILY Homeodomain-like 131 224 IPR009057 -
Lele56g0639 462 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 178 232 IPR017930 -
Lele56g0639 462 ProSiteProfiles Myb-like domain profile. 131 177 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0639 Lele-ChrLele56 4775101 4776696 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0639 104 248 MYB Transcription Factor Family AT1G69560 72.727 1.37e-75 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele56g0639 Myb_DNA-binding 1.7e-14 CL0123