Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0638 ATGAGGCTCGAACTTCATCCTGGAACTCGAACCGTCGTCGTCTCTCCGTCGCTCCTAAAACCCTTTCAAAACCCTAACTTCAATGTTGCCGGACCTCTTTTTACTTCCCTCAATGGATCTCTTCTCTTCAGGCCCATTACCTATTATTCCCATCAACCCAACGCCCCTCCTCTTGTACCTTCTCATTCCGACACCGGTCTCCTTTTCCGAGAAAAAGTTATCTACCTCGATAAACTCAACATCAACTCCAGCAAAGCCCTCCGCCAAAATCCTAACATCCGATCGGTTCCAATTTCCACTCTCAAATCTGTACAAGACTGCCTCTCCTCAATGGGCGTCGAGCGCTCTGCAATGGGTCGAATCCTCGATATGTATCCCCAACTTCTCACATGCGACCCCTATTTTGATCTCTACCCTGTTTTCGATTTCTTCTTGAATGAGGTTGCAATTCCGTTCCCTGATATTCGTAAAGCGATCATACGGTGCCCGAGGCTATTGGTTTGCAGCGTGGATGAGCAGCTCAGACCGACATTGAGCTTCTTGAGGAATTTAGGGTTTGTGGGACCCAATTCCATCAATTACCAGACCGCATTGTTGCTGGTGTCAAGTGTGGAGGACACCCTTACGCCCAAAATTGAGTATTTGCAGAGTCAGGGGTTCTCTTATGAGGAAGTGGTTAATATGGTTATAAGGTCACCTGGATTGTTGATGCTTAGTATCAAAAACAATTTGATGCCGAAGTTTGAGTATTTTTTGGAGGAGATGAATGGGGACATAGCTCAATTGAAGAGATTTCCACAGTATTTTTCATTTAGTTTGGAGAAGAAGATTAAGCCAAGGCATAGACTATTACTCAAGCACGGCTTTACGCTTCCTTTGGCCGAAATGTTAAAGGTTAGTGATGGCGAGTTCGGTGTTAGGTTAGTTGAAATGCGACTACAGTCACTTGAGCGAAGGTCAGGGTGTTACCTAAAGATTTTTTTGCAGGTTGCCCAGTTTTTTGTTGTTTATAAAGCATTAGTTCCCATATTTACTGCAACTGTGGACAATTGTGGAAACCGGTTTAAGTGCCAAGGCCTTAATGGCTTAATGGAACCAGTGTTAGAATCCCTGGCGGATCGTGAAGTGCTTGAGTTCTCTTTCTTGTGA 1149 0.4473 MRLELHPGTRTVVVSPSLLKPFQNPNFNVAGPLFTSLNGSLLFRPITYYSHQPNAPPLVPSHSDTGLLFREKVIYLDKLNINSSKALRQNPNIRSVPISTLKSVQDCLSSMGVERSAMGRILDMYPQLLTCDPYFDLYPVFDFFLNEVAIPFPDIRKAIIRCPRLLVCSVDEQLRPTLSFLRNLGFVGPNSINYQTALLLVSSVEDTLTPKIEYLQSQGFSYEEVVNMVIRSPGLLMLSIKNNLMPKFEYFLEEMNGDIAQLKRFPQYFSFSLEKKIKPRHRLLLKHGFTLPLAEMLKVSDGEFGVRLVEMRLQSLERRSGCYLKIFLQVAQFFVVYKALVPIFTATVDNCGNRFKCQGLNGLMEPVLESLADREVLEFSFL 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0638 382 Pfam mTERF 145 304 IPR003690 GO:0003690|GO:0006355
Lele56g0638 382 Pfam mTERF 85 185 IPR003690 GO:0003690|GO:0006355
Lele56g0638 382 PANTHER CGI-12 PROTEIN-RELATED 82 309 IPR003690 GO:0003690|GO:0006355
Lele56g0638 382 Gene3D Transcription termination factor 3, mitochondrial 84 318 IPR038538 -
Lele56g0638 382 SMART mt_12 84 114 IPR003690 GO:0003690|GO:0006355
Lele56g0638 382 SMART mt_12 259 290 IPR003690 GO:0003690|GO:0006355
Lele56g0638 382 SMART mt_12 156 187 IPR003690 GO:0003690|GO:0006355
Lele56g0638 382 SMART mt_12 226 258 IPR003690 GO:0003690|GO:0006355
Lele56g0638 382 SMART mt_12 190 221 IPR003690 GO:0003690|GO:0006355
Lele56g0638 382 SMART mt_12 119 151 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0638 Lele-ChrLele56 4759236 4761185 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele56g0638 mTERF 3e-32 No_clan