Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele56g0632 | ATGGAGGAGAGGAAGTTCGTGTGCAAGTATTGTAACAAGAAGTACCCATGTGGGAAGTCTCTGGGTGGACACATCAGAACTCATATGAGTAATGAACATTCATCGTATCAATCCAAGGAAGTTAAGACCAATGCCGATGATCGTGTCGTCAAGTTCGATGATGGAAGGAAGAGGAAGAGAGATTTTGGGGTTGAAGAAGCTGCTTCTGAAAACCCCATTTATGGTCTCAGAGAGAATCCCAAGAGGACAACGAAGCTCGTTCATCCCAACGCTGCTATGCAAAAAGAAAGATTCTGCAAAGAATGTGGGAAAGGCTTTTTGTCTCTGAAAGCTCTCTGCGGCCACATGGCTTGTCACTCGGAGAAAGATAAAGCAGGGACGATGAACAAGTTTGAGAACAATTCTGGGTTTAGCGTGAAGCAGAAAATGGTGATGATGGATGATAGCCAATCGGACACGGAGACTTCTGCTCCGAGTTATCCTCGGAGATCCAGAAGAATGAGGTTCAAGACAGTGAATACTGATAAAAATGATCATCATGCTTCTTCTGTTCCTTTGACAAATGGTTCTTCCTCTGTGCCAGAGGTGGAGCAAGAAGAAGAGATCGCTAAGTGTTTGATGTTATTGTCCAAAGACTCCGGCCAAAGGGGTCGTTTTGTTTTGCCTATTGAATCTTCCGACAACAATTCTGTTGTGGTAGAGGTAAAATCACCGTCTGTGGACACTAGAATCACTTTCAAAAATGGTACAAAAAGCTTTGTGTCTAATGGTGTTGAGATCGTGGAGGAGGCGGAGAAGAAGGCGGTGCTGTATAAGAACAAGAAGTTGAAGTCTGCTGAGATTTTTTATTCTGATAATTCAGATTCTGGGTATTTCAGAAATGGTCCCAAAAAGTTGGATTTGTATGTTCCGATTGATAATAAGCAGCTCATCACTAACAGGGAATTCAAAACACCAAAAGTGGAAAGCAGGTCTGGGTTTGATTTTGATCGGAAATATAATTCTGAATATAGTAAGATGCTGATCAAGAACAGAGGAATTACCAGAAGCATTGAACCCAGAAAACCAATTTTGGAGGATTTGGACTATGATGATACAACAGATGGATTGACGAAGGAAGAAGAGTTCATCAATTGGAGAAAGAGACCAAGCTATAATTCAATTGGTGTTCCTTACAAAAAGACACCACCAAATGGTTTTCACAGTGAGGGATCACGGAAGAAGCAAGAGAGCTTAAACAGTGGAAAAATTATCAGTGGCTCTTATGATTCAGCATATGATAATGAGAGTGATGAAAGTAGCACAGACACTGATGCTTATCCTGCTCCGATATATCATAGCAGCAGCAAGGTCATCAATGTAAAGAAGACGAGCCAGTCCAAGACGAAATTGAAGTCAAAGAAAACCAGGGAACATAGATGCCCTATCTGCTACAGAATTTTTAAGTCAGGCCAAGCTTTAGGAGGTCACAAAAGGTCTCATTTTCTTGGAGGTTCTGAAGAGAACACAATAGTAATCAGACAAGATTCTCCTGTTGTTCCATGCCTAATTGATCTCAATCTACCTGCTCCTGTTGATGATTAG | 1584 | 0.4148 | MEERKFVCKYCNKKYPCGKSLGGHIRTHMSNEHSSYQSKEVKTNADDRVVKFDDGRKRKRDFGVEEAASENPIYGLRENPKRTTKLVHPNAAMQKERFCKECGKGFLSLKALCGHMACHSEKDKAGTMNKFENNSGFSVKQKMVMMDDSQSDTETSAPSYPRRSRRMRFKTVNTDKNDHHASSVPLTNGSSSVPEVEQEEEIAKCLMLLSKDSGQRGRFVLPIESSDNNSVVVEVKSPSVDTRITFKNGTKSFVSNGVEIVEEAEKKAVLYKNKKLKSAEIFYSDNSDSGYFRNGPKKLDLYVPIDNKQLITNREFKTPKVESRSGFDFDRKYNSEYSKMLIKNRGITRSIEPRKPILEDLDYDDTTDGLTKEEEFINWRKRPSYNSIGVPYKKTPPNGFHSEGSRKKQESLNSGKIISGSYDSAYDNESDESSTDTDAYPAPIYHSSSKVINVKKTSQSKTKLKSKKTREHRCPICYRIFKSGQALGGHKRSHFLGGSEENTIVIRQDSPVVPCLIDLNLPAPVDD | 527 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele56g0632 | 527 | SUPERFAMILY | beta-beta-alpha zinc fingers | 98 | 494 | IPR036236 | - | |
| Lele56g0632 | 527 | MobiDBLite | consensus disorder prediction | 411 | 428 | - | - | |
| Lele56g0632 | 527 | MobiDBLite | consensus disorder prediction | 147 | 194 | - | - | |
| Lele56g0632 | 527 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 8 | 28 | IPR013087 | - | |
| Lele56g0632 | 527 | Pfam | C2H2-type zinc finger | 472 | 494 | - | - | |
| Lele56g0632 | 527 | Pfam | C2H2-type zinc finger | 99 | 121 | - | - | |
| Lele56g0632 | 527 | Pfam | C2H2-type zinc finger | 6 | 30 | - | - | |
| Lele56g0632 | 527 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 99 | 119 | IPR013087 | - | |
| Lele56g0632 | 527 | MobiDBLite | consensus disorder prediction | 387 | 443 | - | - | |
| Lele56g0632 | 527 | SMART | c2h2final6 | 6 | 28 | IPR013087 | - | |
| Lele56g0632 | 527 | SMART | c2h2final6 | 472 | 494 | IPR013087 | - | |
| Lele56g0632 | 527 | SMART | c2h2final6 | 97 | 119 | IPR013087 | - | |
| Lele56g0632 | 527 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 472 | 494 | IPR013087 | - | |
| Lele56g0632 | 527 | MobiDBLite | consensus disorder prediction | 178 | 194 | - | - | |
| Lele56g0632 | 527 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 97 | 124 | IPR013087 | - | |
| Lele56g0632 | 527 | SUPERFAMILY | beta-beta-alpha zinc fingers | 2 | 32 | IPR036236 | - | |
| Lele56g0632 | 527 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 474 | 494 | IPR013087 | - | |
| Lele56g0632 | 527 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 6 | 33 | IPR013087 | - | |
| Lele56g0632 | 527 | PANTHER | C2H2-LIKE ZINC FINGER PROTEIN | 1 | 526 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele56g0632 | Lele-ChrLele56 | 4741494 | 4743077 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele56g0632 | 1 | 527 | C2H2 Transcription Factor Family | AT1G26610 | 37.251 | 8.90e-79 | 252 |
Transcription factors information