LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele56g0606	ATGGGTAACTGCCTAGATTCTTCTGCCAAAGTAGATACAGCTCAAAGTTCCCGGACTTCTGGATCTGGAATTTCAAAAACTAGCCCTTCATCTGCACCTTCCACCTTGTCAATTCCATCATACAGTGAAAAGAGCACTGCTTCAAGTCTTCCCACACCAAGGTCTGAGGGTGAAATCTTGTCTTCTCCGAATCTAAAGGCCTTTACATTCAGTGACCTAAAGAATGCCACCAGAAATTTTCGTCCCGATAGTCTTCTTGGCGAAGGGGGATTTGGCTATGTTTACAAGGGATGGATTGATGAGAACACGTTCCAGGCTGCAAGACCTGGATCAGGGATGGTTGTTGCTGTGAAAAGGCTAAAACCTGAAGGCAGCTTTCAAGGTCACAAGGAATGGCTGACTGAAGTTAACTACCTTGGGCAACTTCACCATGTAAATCTGGTTAAATTAATTGGGTACTGCTTGGAGGGAGAGAACCGGTTATTGGTCTATGAGTTTATGCCCAAAGGGAGCTTAGAAAATCATCTATTTAGAAGAGGGCCTCAACCACTCTCTTGGTCGGTGAGGATGAAAGTGGCCATTGGGGCTGCCAGAGGGCTCTCTTTTCTCCATAATGCCAAATCGCAAGTCATATACCGTGATTTCAAAGCTTCCAATATCCTACTAGCTGCTGACTTCAATGCTAAACTCTCTGATTTCGGCCTAGCTAAGGCTGGTCCTACTGGCGATAAAACTCATGTGTCTACTCAAGTTATGGGTACTCATGGATATGCAGCTCCTGAATATGTTGCTACAGGTCGGTTGACAGCCAAGAGTGATGTCTATAGCTTTGGGGTTGTGTTGCTTGAACTTCTATCCGGACGGCGTGCAGTTGATAGATCGAAAGCTGGTGTGGAGTTAAATCTGGTAGATTGGGCAAAACCATATTTGGGAGACAAACGAAAACTTTTTCGGATTATGGACACCAAGTTGGAGGGCCAATACCCTCAAAAAGGAGCCTACACAGCTGCAACTCTTGCCCTACAATGCCTGAATAGTGAAGCCAAGGCAAGGCCTCCGATGACTGAGGTCTTAGCGACACTCGAACAGATTGAAGCCCCCAAGAACGCGGGCCGACACTCCCACTCAGAGCCACAGAGATCCCACGTTCCTCGTATAAGAGGCTCTCCTGCACGAAACCGGTCCCCACTACATTTGACTCCAACTGCATCCCCATTGCCATCTCACCGGCAAACTGCTTGTGTACACTGA	1251	0.4716	MGNCLDSSAKVDTAQSSRTSGSGISKTSPSSAPSTLSIPSYSEKSTASSLPTPRSEGEILSSPNLKAFTFSDLKNATRNFRPDSLLGEGGFGYVYKGWIDENTFQAARPGSGMVVAVKRLKPEGSFQGHKEWLTEVNYLGQLHHVNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWSVRMKVAIGAARGLSFLHNAKSQVIYRDFKASNILLAADFNAKLSDFGLAKAGPTGDKTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRRAVDRSKAGVELNLVDWAKPYLGDKRKLFRIMDTKLEGQYPQKGAYTAATLALQCLNSEAKARPPMTEVLATLEQIEAPKNAGRHSHSEPQRSHVPRIRGSPARNRSPLHLTPTASPLPSHRQTACVH	416

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele56g0606	416	Gene3D	Transferase(Phosphotransferase) domain 1	167	384	-	-
	Lele56g0606	416	SUPERFAMILY	Protein kinase-like (PK-like)	51	361	IPR011009	-
	Lele56g0606	416	FunFam	Probable serine/threonine-protein kinase PBL8	167	381	-	-
	Lele56g0606	416	Pfam	Protein tyrosine and serine/threonine kinase	84	360	IPR001245	GO:0004672\|GO:0006468
	Lele56g0606	416	FunFam	Serine/threonine-protein kinase BIK1	47	166	-	-
	Lele56g0606	416	MobiDBLite	consensus disorder prediction	1	58	-	-
	Lele56g0606	416	ProSiteProfiles	Protein kinase domain profile.	80	364	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele56g0606	416	MobiDBLite	consensus disorder prediction	368	416	-	-
	Lele56g0606	416	ProSitePatterns	Protein kinases ATP-binding region signature.	86	118	IPR017441	GO:0005524
	Lele56g0606	416	Gene3D	Phosphorylase Kinase; domain 1	56	166	-	-
	Lele56g0606	416	PANTHER	OS01G0588500 PROTEIN-RELATED	41	365	-	-
	Lele56g0606	416	CDD	STKc_IRAK	86	364	-	-
	Lele56g0606	416	MobiDBLite	consensus disorder prediction	395	416	-	-
	Lele56g0606	416	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	210	222	IPR008271	GO:0004672\|GO:0006468
	Lele56g0606	416	MobiDBLite	consensus disorder prediction	368	382	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele56g0606	Lele-ChrLele56	4460348	4463064	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele56g0606	56	361	Glycoside Hydrolase	AT3G07070	51.780	1.26e-107	322

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-VIIa-2	Lele56g0606		PK_Tyr_Ser-Thr	2.5e-47	CL0016