Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0605 ATGAGAGATGAGAAGAAGAGATATATAGGTGATCCGAGGGATTTGCATGCTCTGAAAGTAGACAAGGGAATAAGATTTAAAACTCGTAAGCTCAAGAAGTTCTCTTACAAAGTCTTGGAAGCTGCCACACGCAGCAAAATTAGCCATCCGAACGTGGTGAATCTCATAGGGTATTGCCGTGAGGGTCAGCATAGAATACTTGTGATTGAGTACATGATTGAAGGAAGCTTGGAGGACCATCTCTCCAAAGGAACAGAAGACAGAGGAAAGCTAAACTGGAACAGAAGAATTAGCATAGCAATTGGGGCTGCAAGGGGATTAGAGTATCTTCACATATATGAAACACCAGTAATTCATCGTGATGTTAAATCTTCAAATATCCCGCTAGATGCTGTAAGAGTCATAATGTGGCAGAACTTCAATGCAAAGCTCTCTGACTTTAGACTGGCTAGAGATGGACCTGAAGATGATCAGTCCCATGTATCCACAAAAATCCTTGGCACTAGAGGCTATTTTGCCCCTAAGTACAGAGCTACATTTAGGAAACATTCAGATGGGGGAGTAGGTAATCTTACCCAGTTGGCTGAACCATTTCTAAGCAACAAATTGGAACTTCGCGTTATTGACAAGAGACTAGTAAGAATACAAAGGCAAAAGCGAAGGCTTCTTCCAACTTTATGTTTTGAGTACACTTCTTCTCACTGCCTGCAAATAAGAACAAGAAATAGGAAAAAGGAAAAAGAAACTTTGGCAGAATTGAATTATACTTACAAAGCTTTTGGAAAGAAGGTAGCAATATTCTCTTGA 807 0.4015 MRDEKKRYIGDPRDLHALKVDKGIRFKTRKLKKFSYKVLEAATRSKISHPNVVNLIGYCREGQHRILVIEYMIEGSLEDHLSKGTEDRGKLNWNRRISIAIGAARGLEYLHIYETPVIHRDVKSSNIPLDAVRVIMWQNFNAKLSDFRLARDGPEDDQSHVSTKILGTRGYFAPKYRATFRKHSDGGVGNLTQLAEPFLSNKLELRVIDKRLVRIQRQKRRLLPTLCFEYTSSHCLQIRTRNRKKEKETLAELNYTYKAFGKKVAIFS 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0605 268 SMART serkin_6 3 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele56g0605 268 ProSiteProfiles Protein kinase domain profile. 1 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele56g0605 268 Pfam Protein kinase domain 35 175 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele56g0605 268 PANTHER OS01G0588500 PROTEIN-RELATED 40 180 - -
Lele56g0605 268 Gene3D Transferase(Phosphotransferase) domain 1 13 260 - -
Lele56g0605 268 SUPERFAMILY Protein kinase-like (PK-like) 30 180 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0605 Lele-ChrLele56 4457688 4460247 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0605 38 179 Glycoside Hydrolase AT3G07070 52.448 2.30e-41 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele56g0605 Pkinase 2e-22 CL0016