Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0602 ATGAGGGGACTTACTGCTGCTACCTCAGCCTTCTCCGCCCCTGTCACTGCTGCGAGTAAAAAGCAAAACTTTCCTCCGAAGCTCAAACTCTGCTCTCAGCTGCATCGTTACAAGTTGAGCAATGGAAGCTTAGGGTTCCACTGCTGCATCTCGAGGTTGTGCTTTGATCTAGCTTCTCCTTACCTGAGCTTAAGCAGTTTTTCAATTTCTGAAGCCCTGATCTCTGCGGTGATGGGAAAGACTCCTGGAAAATGGATCAAGGCCTTACTTTCGGGGAAGAAATCAAACTCTCATTCATCAAAAAAGAAAGATTCCTTTCGTTTAAGTACCAAGGACTTGCTGGCAGTGCCATCTGAAACACATGTGTCTGATCCAATTGCGGTTCCTACACTGATATCCCAACCCACTTCTGGAGCTACTGCAACTAAGGAATCAGTTTCTGAAAAAGGCCTAGTAAGTGAATCGTCAAATGACAGGGTTGTTATCTCAGCTAGAGATGAAGAGACCAGTGCGCAAGATGTGGTTGGTTTTGGTTCACAAGATGATCCTGATAAAATCAGGCTTAACCAAGCTGCTGTAAAAGCTCAGGCTGCTTTTAGGGGCTATCAGGCTCGGCGGGAATTTCAAACACTCAAAGGTATCATACAGCTGCAAGCCCTTATTCGTGGCAACTTGGTCAGGAAACAAGCAGTTGCTACTTTATACTGTGTGAATGGAATAGTTAAGTTTCAAGCATTGGTTCGTGGTAACAAGGTTAGGCGTTCTGATATTGGTCTTGCAGTGCATAAAAGTTGCAAGGGTACTAAATGTTTAATTGCTGCTGGCGGATCAACATCTACGCAGACAGAAAAGCGGTCCAAAAGTGTCTTTCTTAACAAGCTTCTGGCTTCATCATCCTCTGTCTCTCCTCTGTGTATCAACTATGATCCTGAACAAAGTAATTCGGCTTCAGATTGGTTTGACCGTTGGACAAGTTCTCTCTTCTGGGCACCTCTTCTGAGTCTGGAGTCAAAAACAACACATGAGTCACTGTCTAATGAGAAAAATTGCAACAGTCAAAGAGTTGAAAAGAATGGCGTCCAAGTTAAAAGAAATGCCCGTAGAAGTTCTGGTGTTAAAGCTAATGATGGTTCAACCTCGGATTCAAACAAAAATAAACACCGTCCAAAAAAGGTTTCAGCTCACCCATTGCATTCAGGCCAAGAAAATACACAGAAGGAAGTTGAGAAAAGTTATTTAAGAAAACCACTCAAGCAGAGTGTTTCTGATAGATCTGAGATTGTTAATGGAAAAGGAAAAGACATACCAAGAAAAGTATCTGGTCATACTGTCACTGATGTTTCAGAGAATGAACCAAATGTTTCTGCAGAAAAAATTACAGATTCAGCTGTGTCAAAATCCAAACATTCTGATCATGAGCAAAGCCTCGTACAACAAGCAGAAGATGAACATGATTCTCCCACAGCTAACTTGCCATCTGGATTGAAGAACAGTAAAGATGACGGTATTCAAGGAGTCAATGAGGACTTGAACTGCATTGATTGTGTGAGCCCTAAGAATTGCAAGAGAAGAGCTTCACTGCCTGCTATGTTTGACAGTCAAGATGATGGTGTGCAAAAAACTCCAAGACTGCCTAGCTACATGGCCCCTACTGAATCTGCAAAAGCTAGGGTAAGAGGACAAGGCTCCCCTAGGCTTGTTACTGACTTGATGGATAAAAATGGTCCAACCCGGCGGCATTCACTTTCATCTTCAGTCAATGGCAAGTTAGGTTCATTTTCTCCACGAGCAGAAAGACTGGGAGCTTTGAGCAGCAAGGGAGTAATAAGAACTGATAAATCTCTGTCATCTTCAAGGGATGGGAGTGAGAAGTTGATCCAACCTCAGTGGAGAAGGTGA 1899 0.4313 MRGLTAATSAFSAPVTAASKKQNFPPKLKLCSQLHRYKLSNGSLGFHCCISRLCFDLASPYLSLSSFSISEALISAVMGKTPGKWIKALLSGKKSNSHSSKKKDSFRLSTKDLLAVPSETHVSDPIAVPTLISQPTSGATATKESVSEKGLVSESSNDRVVISARDEETSAQDVVGFGSQDDPDKIRLNQAAVKAQAAFRGYQARREFQTLKGIIQLQALIRGNLVRKQAVATLYCVNGIVKFQALVRGNKVRRSDIGLAVHKSCKGTKCLIAAGGSTSTQTEKRSKSVFLNKLLASSSSVSPLCINYDPEQSNSASDWFDRWTSSLFWAPLLSLESKTTHESLSNEKNCNSQRVEKNGVQVKRNARRSSGVKANDGSTSDSNKNKHRPKKVSAHPLHSGQENTQKEVEKSYLRKPLKQSVSDRSEIVNGKGKDIPRKVSGHTVTDVSENEPNVSAEKITDSAVSKSKHSDHEQSLVQQAEDEHDSPTANLPSGLKNSKDDGIQGVNEDLNCIDCVSPKNCKRRASLPAMFDSQDDGVQKTPRLPSYMAPTESAKARVRGQGSPRLVTDLMDKNGPTRRHSLSSSVNGKLGSFSPRAERLGALSSKGVIRTDKSLSSSRDGSEKLIQPQWRR 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0602 632 MobiDBLite consensus disorder prediction 341 502 - -
Lele56g0602 632 Pfam Protein of unknown function (DUF4005) 533 608 IPR025064 -
Lele56g0602 632 Pfam IQ calmodulin-binding motif 240 254 IPR000048 GO:0005515
Lele56g0602 632 Pfam IQ calmodulin-binding motif 190 209 IPR000048 GO:0005515
Lele56g0602 632 Pfam IQ calmodulin-binding motif 212 229 IPR000048 GO:0005515
Lele56g0602 632 MobiDBLite consensus disorder prediction 609 624 - -
Lele56g0602 632 MobiDBLite consensus disorder prediction 341 359 - -
Lele56g0602 632 MobiDBLite consensus disorder prediction 462 480 - -
Lele56g0602 632 MobiDBLite consensus disorder prediction 481 497 - -
Lele56g0602 632 MobiDBLite consensus disorder prediction 402 440 - -
Lele56g0602 632 MobiDBLite consensus disorder prediction 443 461 - -
Lele56g0602 632 SMART iq_5 210 231 IPR000048 GO:0005515
Lele56g0602 632 SMART iq_5 187 209 IPR000048 GO:0005515
Lele56g0602 632 Gene3D - 186 234 - -
Lele56g0602 632 MobiDBLite consensus disorder prediction 577 591 - -
Lele56g0602 632 ProSiteProfiles IQ motif profile. 212 239 IPR000048 GO:0005515
Lele56g0602 632 PANTHER IQ-DOMAIN 5-RELATED 78 587 - -
Lele56g0602 632 ProSiteProfiles IQ motif profile. 188 216 IPR000048 GO:0005515
Lele56g0602 632 MobiDBLite consensus disorder prediction 532 632 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0602 Lele-ChrLele56 4431981 4436594 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0602 78 632 IQD Protein Family AT1G14380 36.913 1.88e-83 271