Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0601 ATGAAAATTTGCTGGGTTTCTGCAATTTTTCTTGTTATTCTTACTCACATTTCAACTGCACAGCTAACACCAAGTGAGAGTAGAATTCTATTCCAAGTTCAGAAAAATCTTGAATATCCTCAGGTTCTTCAAGGATGGAACAACTGGACCAATTTCTGTTATCTTCCTTATTCACCTTCTCTCCAGATTGTCTGCTCTAACAGTCATGTAACAGAATTAACAATCATTGGAAACAAAACAAACTCTCTTTCTGAAACATTTTCCATTCATCCTTTCTTCACTATCTTGACAAAGCTTTCAAATTTGAAGGTACTTTCATTAGTGTCTTTGGGTTTGTGGGGTCCTTTACCAGCCAAGATCAACAGGTTTGGGTCTCTTCAATTTCTGAACTTGAGATCAAATTCCATTCATGGCGAAATCCCATCATCAATCTCTTCCATGAAAAGTCTCAGGAGTCTGGTTTTGTCTGGTAATTTGTTCAATGGCACTGTCCCAGATCTTAAAAGATTAACTTCTCTTGAAGAACTCAACCTGGGAAACAACAAACTAGGTCCTGAGTTCCCTTCATTGGGCAATAATCTTGTAAGTTTAGTATTGAAAAGCAATTCTCTGAGGTCTAAACTTCCTTCCAAGATTAATCAGTTTCACAAGCTTCAAAAACTTGATATTTCTTCCAATCAAGTTTCTGGAAACATCCCATCTTCTCTGTTTTCTCTGTCTTCCATTCAGTATATGAACTTTGCAGACAACAAACTAAGCGGTTCCCTTCCAATGAACATAAGATGTGGTTCTTCTCTCAACTTTGTGGATATCTCAAACAATGTTTTGTTAGGAAAATTGCCGTCCTGCATTGGGTCAACCTCGAAGTCCTCAAATCGAACGGTTTTGTATTCTGGGAATTGCTTGTCCATAAGAGGCTCAAAAGATCAACACCCAACTTCATATTGCAAGAAAGAGGAAGCTTTAGCTGCTAAGCCTCTTGAAGGAAGCAAGAAAAAGTCAGTTATGAGATTAGGGTTGATACTTGGTATAATTGGAGGGTCTGTAGGAATTTCAATGCTTTCAGCTCTGATCATTCTTATCATCTTGAGGAAGACCAAACCAGAAATAGCTGATAATTACATAGAAAGATCTGTTCCTGATAAATCACCTTCTCATGCATCCCCAAGACCAAACACGGATACAAGACGAGTTCCTCAGACAACGAGGCTGGAAGCGATTGGACTTCAACCATATAGAATCTTCACACTGGAGGAAATAGAGGAGACAACAAACAATTTTGACCCATCAAATCTGATAGGAGAAGGAACAGATGGACAGCAATATAAAGGTTGGATCAGAGATGGGTCTGTGGTCCTTATTAACTGTGTGAAGCTAAAGCTAATGCATAAGAATGTGACACAAAACCATATTGAGGTGTTGTCCAATTTGAGGCATAGGCATTTGGCAAGTGTTATTGGACACTGCATAATTGCCTCTCAGGACCATCATCAGAACACAAGCACACTCTTTCTTGTTTATGAACAATTCTCCAATGGGTCATTGAGGGATCATTTAATAGATTGGAGAAAGAAGGAAGTGCTGAAATGGCCACAAAGAATGGCGATCTCCATAGGGATTGCAAGGGGAATCCAGTTCTTGCATACAGGGGTTGTTCCTGGTATATTTGGGAACAAGATAAAGATTGAGAAAATCCTTTTGGATGATAGTCTCAATGCAAAAGTTAGTGGATATAACATTCCATTGTTATTCAATAATATTGACAGCACTGACAACACCGCAGAAAAGGAAGATATATATCAGTTTGGCGTTATTCTACTGGAAATCATCACTGGCAAATCAATTTCTTCAGTCAATGAAGTAGAGGAGCTGAAAGATGAGCTAGAGAGAAGTTTATCAGAAGCAGCATCAGTACTTAGAGGAGTGGCTGATCCCTCAATCCGGGGAAGTTATGCGTATGAATCAATGAGAAACACAGTTCAGATTACCGTAAGTTGCCTCAGTAAAGTTCCAAACACACGCCCTTCAATAGAAGATGTTCTTTGGAATTTGCAGTACTCAATGCAGGTCCAAGAGAACTGGACCAGCAGTGGAAATCTCGCACTGGGTACCAGATTTTAG 2121 0.3923 MKICWVSAIFLVILTHISTAQLTPSESRILFQVQKNLEYPQVLQGWNNWTNFCYLPYSPSLQIVCSNSHVTELTIIGNKTNSLSETFSIHPFFTILTKLSNLKVLSLVSLGLWGPLPAKINRFGSLQFLNLRSNSIHGEIPSSISSMKSLRSLVLSGNLFNGTVPDLKRLTSLEELNLGNNKLGPEFPSLGNNLVSLVLKSNSLRSKLPSKINQFHKLQKLDISSNQVSGNIPSSLFSLSSIQYMNFADNKLSGSLPMNIRCGSSLNFVDISNNVLLGKLPSCIGSTSKSSNRTVLYSGNCLSIRGSKDQHPTSYCKKEEALAAKPLEGSKKKSVMRLGLILGIIGGSVGISMLSALIILIILRKTKPEIADNYIERSVPDKSPSHASPRPNTDTRRVPQTTRLEAIGLQPYRIFTLEEIEETTNNFDPSNLIGEGTDGQQYKGWIRDGSVVLINCVKLKLMHKNVTQNHIEVLSNLRHRHLASVIGHCIIASQDHHQNTSTLFLVYEQFSNGSLRDHLIDWRKKEVLKWPQRMAISIGIARGIQFLHTGVVPGIFGNKIKIEKILLDDSLNAKVSGYNIPLLFNNIDSTDNTAEKEDIYQFGVILLEIITGKSISSVNEVEELKDELERSLSEAASVLRGVADPSIRGSYAYESMRNTVQITVSCLSKVPNTRPSIEDVLWNLQYSMQVQENWTSSGNLALGTRF 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0601 706 Pfam Protein tyrosine and serine/threonine kinase 432 576 IPR001245 GO:0004672|GO:0006468
Lele56g0601 706 MobiDBLite consensus disorder prediction 374 398 - -
Lele56g0601 706 Gene3D Transferase(Phosphotransferase) domain 1 510 591 - -
Lele56g0601 706 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 190 685 - -
Lele56g0601 706 Gene3D Transferase(Phosphotransferase) domain 1 592 691 - -
Lele56g0601 706 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g02780 23 192 - -
Lele56g0601 706 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 194 321 - -
Lele56g0601 706 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 510 699 - -
Lele56g0601 706 ProSiteProfiles Protein kinase domain profile. 427 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele56g0601 706 SUPERFAMILY L domain-like 37 300 - -
Lele56g0601 706 SUPERFAMILY Protein kinase-like (PK-like) 407 684 IPR011009 -
Lele56g0601 706 Gene3D Ribonuclease Inhibitor 23 327 IPR032675 -
Lele56g0601 706 Coils Coil 618 638 - -
Lele56g0601 706 Gene3D Phosphorylase Kinase; domain 1 392 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0601 Lele-ChrLele56 4424153 4427780 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0601 18 617 Miscellaneous Gene Families AT2G02780 48.657 1.81e-178 523
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Lele56g0601 PK_Tyr_Ser-Thr 1.3e-08 CL0016