Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0595 ATGAGAAGCTCGAGGTTTCGGGGAGTTAGCTGACATAGGTGGACAGGAAGGTATGAGGCTCACCTATGGGATAAAGGAACATGGAATCCAACTCAGAAGAAGAAAGGGAAGGAAGGGATTTACACTGATGAAGAAGGGGCTGCTAGAGCTTATGATTTGGCTGCACTATAGAGAAGCAGTGGTTTTTCTAGAGGTGTATCAAAGTACAGGGAAGTAGCAAGGCACCATCACAACGGCAGATGGGAAGCAAGGATGGGGAGAGTATTTGGTAACAGGCTGCGGTGCATCACGAAGCAGCCACTTAGGTATCCAACTTCATCCTCAATCCATTCCCAGCTGGTGATTCTGCAGACCAAGCAAGGAAGTTCACAATACATGAGCTCTCTAAATGCTTGCAATAATAAGTCATCTTCCCCAACAGCACTAGGGATTCTCATGAAATCCTCAGTATTTAGAGAGCTGATGCAGAAGAATCTGAATTCTGCTAATGAAGAATCAGAAGAGAGTGAACTGAAAATCCCACAAGAAGGAAGTGATGGGTTTGGAGTGGCTTTTGATCATGAAATTGCAAGTAACTCTTTCTTATGCCCTTTCAATAATAATAGCAGATTTTGCATGGAGTCACCAGAAGAAAGCACGTGGCCATGGTATCATAGAACCACGCAATCCTCCCCATGGAGTGGTGCTTTAAACTGA 696 0.4454 MRSSRFRGVSXHRWTGRYEAHLWDKGTWNPTQKKKGKEGIYTDEEGAARAYDLAALXRSSGFSRGVSKYREVARHHHNGRWEARMGRVFGNRLRCITKQPLRYPTSSSIHSQLVILQTKQGSSQYMSSLNACNNKSSSPTALGILMKSSVFRELMQKNLNSANEESEESELKIPQEGSDGFGVAFDHEIASNSFLCPFNNNSRFCMESPEESTWPWYHRTTQSSPWSGALN 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0595 231 SMART rav1_2 5 71 IPR001471 GO:0003700|GO:0006355
Lele56g0595 231 Coils Coil 152 172 - -
Lele56g0595 231 ProSiteProfiles AP2/ERF domain profile. 5 56 IPR001471 GO:0003700|GO:0006355
Lele56g0595 231 Gene3D AP2/ERF domain 4 61 IPR036955 GO:0003700|GO:0006355
Lele56g0595 231 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 2 56 - -
Lele56g0595 231 SUPERFAMILY DNA-binding domain 4 58 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0595 Lele-ChrLele56 4394216 4396842 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0595 2 92 AP2-EREBP Transcription Factor Family AT1G51190 45.385 2.28e-26 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele56g0595 AP2 0.00036 CL0081